3044
91%

Ran 10 May 2017 10:55PM UTC

Jobs 4

Files 25

Run time 14s

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Build # 3044

Build Type

push

jenkins

Committed by

Commit Message

Precompute likelihoods and join to observations.

Provides a >2x speedup in genotyping performance.

Run Details

105 of 105 new or added lines in 4 files covered. (100.0%)

1013 of 1273 relevant lines covered (79.58%)

3.18 hits per line

Lines	Coverage	File
1	100.0	avocado-core/src/main/scala/org/bdgenomics/avocado/realigner/Realigner.scala
1	100.0	avocado-core/src/main/scala/org/bdgenomics/avocado/genotyping/TrioCaller.scala
5	100.0	avocado-core/src/main/scala/org/bdgenomics/avocado/genotyping/DiscoverVariants.scala
9	100.0	avocado-core/src/main/scala/org/bdgenomics/avocado/models/Observation.scala
10	100.0	avocado-core/src/main/scala/org/bdgenomics/avocado/genotyping/BiallelicGenotyper.scala

ID	Job ID	Ran	Coverage
1	3044.1	10 May 2017 10:55PM UTC	79.58
2	3044.2	10 May 2017 10:56PM UTC	79.58
3	3044.3	10 May 2017 10:56PM UTC	79.58
4	3044.4	10 May 2017 10:56PM UTC	79.58

Detailed source file information is not available for this build.