bigdatagenomics / adam / 1968
82%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 148
Run time 1min
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1968

Pull #1508

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/776d1ece39556a5e1e879ff6d2cdfa6263f089ad">776d1ece3<a href="https://github.com/bigdatagenomics/adam/commit/776d1ece39556a5e1e879ff6d2cdfa6263f089ad">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/c017ebc5483705aac4f579c3a1a4b1ccc62214c6">c017ebc54</a>">c017ebc54</a><a href="https://github.com/bigdatagenomics/adam/commit/776d1ece39556a5e1e879ff6d2cdfa6263f089ad"> into dbe5c97c3">dbe5c97c3</a>
Pull Request #1508: [ADAM-1502] Preserve contig ordering in TwoBitFile sequence dictionary.

11 of 11 new or added lines in 1 file covered. (100.0%)

5046 of 6170 relevant lines covered (81.78%)

6.53 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
78.26
 -4.35% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
85.17
 0.15% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
93.33
 13.33% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
97.78
 -1.11% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
70.05
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
1
89.13
 -2.17% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
1
82.54
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
59.46
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
86.96
 -4.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab6InFormatter.scala
1
61.25
 1.25% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
90.1
 2.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
93.75
 -0.52% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
96.63
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
91.26
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
77.78
 -5.56% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/InterleavedFASTQInFormatter.scala
2
65.38
 -3.85% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
2
96.23
 -3.77% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
2
87.38
 -0.62% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
3
81.65
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
3
61.04
 2.6% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
5
78.3
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 1968.1 249
81.67
2 1968.2 249
81.69
3 1968.3 249
81.69
4 1968.4 249
81.67
5 1968.5 249
81.65
6 1968.6 249
81.67
7 1968.7 249
81.67
8 1968.8 249
81.65
Source Files on build 1968
Coverage ∆ File Lines Relevant Covered Missed Hits/Line