bigdatagenomics / adam / 1926
82%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 146
Run time 53s
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1926

Pull #1470

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/a56b85ddf10990ff87beab2f7354062f8d13accd">a56b85ddf<a href="https://github.com/bigdatagenomics/adam/commit/a56b85ddf10990ff87beab2f7354062f8d13accd">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/3670c7efc8c6cab0f5c0ab75cafde517b36dc345">3670c7efc</a>">3670c7efc</a><a href="https://github.com/bigdatagenomics/adam/commit/a56b85ddf10990ff87beab2f7354062f8d13accd"> into a70c371b7">a70c371b7</a>
Pull Request #1470: [ADAM-1469] Don't filter on whether reads have mismatches during realignment

1 of 1 new or added line in 1 file covered. (100.0%)

4918 of 6026 relevant lines covered (81.61%)

6.52 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
93.02
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
88.0
 -1.0% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
1
81.55
 0.43% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
61.25
 1.25% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
65.38
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
2
73.33
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
2
69.54
 -1.02% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
2
79.82
 -1.83% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
2
87.13
 -0.99% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
95.45
 -3.03% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
2
73.58
 -1.89% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
3
62.34
 -2.6% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
95.51
 -1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
4
78.15
 0.77% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 1926.1 246
81.51
2 1926.2 246
81.53
3 1926.3 246
81.51
4 1926.4 246
81.53
5 1926.5 246
81.46
6 1926.6 246
81.48
7 1926.7 246
81.46
8 1926.8 246
81.48
Source Files on build 1926
Coverage ∆ File Lines Relevant Covered Missed Hits/Line