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pymc-devs / pymc3 / 4581
87%

Build:
DEFAULT BRANCH: master
Ran 30 Mar 2017 12:19PM UTC
Jobs 6
Files 139
Run time 30min
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twiecki
Add Cholesky to MVN distribution (#1875)

* add cholesky for mvn distribution

* added logp function that uses cholesky factor

* forgot to include theano solve

* remove commented out code

* moved get_tau_chol into MvNormal, uses same logic to set logp method

* add packed_chol keyword, fix a few linter errors

* add logp tests

* minor refactoring of logp

* fix reference dists for different logpdfs

* remove packed_chol

* fix tests: pdf->logpdf

* remove unused import

* add packed_chol

* compute chol more stably when given tau

* logp done; work on random

* fix random

* make logp style consistent

* remove unused import

* remove packed_chol

* remove gpu_compat flag because logdet is no longer used

* improve logp readability

* fix logps

* rebase (hopefully not breaking anything)

* fix broken test things

* fix (for real this time) logp shape issues

10429 of 12116 relevant lines covered (86.08%)

2.76 hits per line

Jobs
ID Job ID Ran Files Coverage
1 4581.1 (PYTHON_VERSION=2.7 TESTCMD="--durations=10 --ignore=pymc3/tests/test_examples.py --cov-append --ignore=pymc3/tests/test_distributions_random.py --ignore=pymc3/tests/test_variational_inference.py --ignore=pymc3/tests/test_shared.py") 30 Mar 2017 12:49PM UTC 0
75.17
Travis Job 4581.1
2 4581.2 (PYTHON_VERSION=2.7 RUN_PYLINT="true" TESTCMD="--durations=10 --cov-append pymc3/tests/test_distributions_random.py pymc3/tests/test_shared.py") 30 Mar 2017 12:23PM UTC 0
30.13
Travis Job 4581.2
3 4581.3 (PYTHON_VERSION=2.7 TESTCMD="--durations=10 --cov-append pymc3/tests/test_examples.py pymc3/tests/test_variational_inference.py") 30 Mar 2017 12:21PM UTC 0
32.76
Travis Job 4581.3
4 4581.4 (PYTHON_VERSION=3.6 TESTCMD="--durations=10 --cov-append --ignore=pymc3/tests/test_examples.py --ignore=pymc3/tests/test_distributions_random.py --ignore=pymc3/tests/test_variational_inference.py --ignore=pymc3/tests/test_shared.py") 30 Mar 2017 12:43PM UTC 0
75.16
Travis Job 4581.4
5 4581.5 (PYTHON_VERSION=3.6 TESTCMD="--durations=10 --cov-append pymc3/tests/test_distributions_random.py pymc3/tests/test_shared.py") 30 Mar 2017 12:19PM UTC 0
30.14
Travis Job 4581.5
6 4581.6 (PYTHON_VERSION=3.6 TESTCMD="--durations=10 --cov-append pymc3/tests/test_examples.py pymc3/tests/test_variational_inference.py") 30 Mar 2017 12:34PM UTC 0
32.77
Travis Job 4581.6
Source Files on build 4581
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