bigdatagenomics / adam / 1897
81%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 0
Run time 19s
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1897

Pull #1440

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/15e9ae6454eb9e6d98f78946199a7189468d2420">15e9ae645<a href="https://github.com/bigdatagenomics/adam/commit/15e9ae6454eb9e6d98f78946199a7189468d2420">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/791dc90293283fdee2d92b529f359fc6781e07db">791dc9029</a>">791dc9029</a><a href="https://github.com/bigdatagenomics/adam/commit/15e9ae6454eb9e6d98f78946199a7189468d2420"> into fd0cb6e37">fd0cb6e37</a>
Pull Request #1440: Dependency version bump + BroadcastRegionJoin fix

15 of 15 new or added lines in 10 files covered. (100.0%)

4696 of 5847 relevant lines covered (80.31%)

1.61 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
75.06
 0.26% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
1
71.64
 -1.09% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala
1
84.31
 -1.69% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/CoverageRDD.scala
1
89.13
 -4.2% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
77.36
 1.89% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
96.97
 -1.52% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
84.99
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
87.95
 -1.2% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastqRecordConverter.scala
1
93.02
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
89.11
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
97.78
 -1.11% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
80.0
 -5.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/InterleavedFASTQInFormatter.scala
1
81.55
 0.51% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
62.16
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
89.13
 -4.2% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
1
66.23
 5.19% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
2
92.13
 -2.25% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
2
63.46
 -3.85% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
2
96.23
 -3.77% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
3
76.47
 -4.41% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
3
80.73
 -2.75% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
9
75.06
 0.26% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 1897.1 243
80.3
2 1897.2 243
80.31
3 1897.3 243
80.43
4 1897.4 243
80.45
5 1897.5 243
80.3
5 1897.5 243
80.31
6 1897.6 243
80.45
7 1897.7 243
80.43
Source Files on build 1897
Coverage ∆ File Lines Relevant Covered Missed Hits/Line