bigdatagenomics / adam / 1889
81%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 0
Run time 11s
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1889

Pull #1443

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/27a25d8d1f707bfe451f787b310ef7f5689a5c5e">27a25d8d1<a href="https://github.com/bigdatagenomics/adam/commit/27a25d8d1f707bfe451f787b310ef7f5689a5c5e">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/5600cf65337257ca6acec510594024af6716b8e4">5600cf653</a>">5600cf653</a><a href="https://github.com/bigdatagenomics/adam/commit/27a25d8d1f707bfe451f787b310ef7f5689a5c5e"> into b1fce6770">b1fce6770</a>
Pull Request #1443: [ADAM-1442] Fix thread pool deadlock in GenomicRDD.pipe

16 of 16 new or added lines in 2 files covered. (100.0%)

4684 of 5832 relevant lines covered (80.32%)

0.8 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
90.0
 -10.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/OutFormatter.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
71.43
 -3.57% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/Consensus.scala
1
96.97
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
90.91
 -1.01% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
87.95
 -1.2% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastqRecordConverter.scala
1
58.75
 -1.25% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
67.31
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
97.78
 -1.11% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
69.54
 0.51% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
87.0
 -1.0% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
2
55.62
 -0.59% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Transform.scala
2
90.1
 0.99% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
91.67
 -8.33% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
2
86.67
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
2
83.49
 -0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
2
81.47
 -0.43% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
3
62.34
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
4
94.38
 -4.49% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
5
84.69
 -0.77% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
7
73.78
 -1.03% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 1889.1 243
80.32
2 1889.2 243
80.33
3 1889.3 243
80.38
4 1889.4 243
80.33
5 1889.5 243
80.4
6 1889.6 243
80.38
7 1889.7 243
80.32
8 1889.8 243
80.4
Source Files on build 1889
Coverage ∆ File Lines Relevant Covered Missed Hits/Line