bigdatagenomics / adam / 2522

DEFAULT BRANCH: master
Ran
Jobs 8
Files 141
Run time 3min
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2522

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jenkins

heuermh 
[ADAM-1164] Add parallel file merger.

Resolves #1164.

92 of 92 new or added lines in 6 files covered. (100.0%)

4462 of 5832 relevant lines covered (76.51%)

6.11 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/FileMerger.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/serialization/ADAMKryoRegistrator.scala
27
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/ParallelFileMerger.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/Transform.scala
1
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/projections/Projection.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
6
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2522.1 0
76.35
2 2522.2 0
76.37
3 2522.3 0
76.35
4 2522.4 0
76.37
5 2522.5 0
76.39
6 2522.6 0
76.39
7 2522.7 0
76.41
8 2522.8 0
76.41
Source Files on build 2522
Detailed source file information is not available for this build.