bigdatagenomics / adam / 2507

DEFAULT BRANCH: master
Ran
Jobs 8
Files 140
Run time 3min
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2507

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jenkins

fnothaft 
Add pipe API in and out formatters for Features

64 of 64 new or added lines in 8 files covered. (100.0%)

4401 of 5741 relevant lines covered (76.66%)

6.12 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
73.58
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
75.0
 -5.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
67.31
 3.85% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
90.1
 1.98% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
64.29
 -7.14% adam-core/src/main/scala/org/bdgenomics/adam/projections/Projection.scala
1
97.78
 -1.11% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
69.54
 0.51% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
87.0
 -1.0% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
1
98.48
 1.52% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
85.15
 0.15% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
90.91
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
93.02
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
91.89
 0.54% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
2
54.97
 -0.58% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Transform.scala
2
91.67
 -4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
2
80.0
 -13.33% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
2
83.49
 2.75% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
2
81.3
 -0.43% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
3
58.75
 -3.75% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
3
63.64
 1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
94.38
 -2.25% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
9
74.48
 -1.03% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2507.1 243
76.54
2 2507.2 243
76.52
3 2507.3 243
76.52
4 2507.4 243
76.52
5 2507.5 243
76.52
6 2507.6 243
76.54
7 2507.7 243
76.54
8 2507.8 243
76.54
Source Files on build 2507
Coverage ∆ File Lines Relevant Covered Missed Hits/Line