bigdatagenomics / adam / 1853
77%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 133
Run time 56s
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1853

Pull #1434

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/86777abd59cd3f38efc86bb19fd76eb11707852c">86777abd5<a href="https://github.com/bigdatagenomics/adam/commit/86777abd59cd3f38efc86bb19fd76eb11707852c">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/63b0a6e71b803c907cdd725559cc95763b35b754">63b0a6e71</a>">63b0a6e71</a><a href="https://github.com/bigdatagenomics/adam/commit/86777abd59cd3f38efc86bb19fd76eb11707852c"> into 07c1982fb">07c1982fb</a>
Pull Request #1434: Add loadReadsFromSamString function into ADAMContext

35 of 35 new or added lines in 2 files covered. (100.0%)

4346 of 5681 relevant lines covered (76.5%)

6.11 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
6
76.18
 1.69% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
70.0
 -5.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
97.75
 2.25% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
91.35
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
90.1
 2.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
71.15
 1.92% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
88.98
 -0.85% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
70.05
 1.02% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
1
91.11
 -2.22% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
64.94
 3.9% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
1
87.95
 -1.2% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastqRecordConverter.scala
1
71.43
 -3.57% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/Consensus.scala
2
85.15
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
89.9
 -2.02% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
2
93.02
 -2.33% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
2
81.74
 -0.43% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
3
54.39
 -1.75% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Transform.scala
3
73.58
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
3
82.57
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
3
76.47
 -4.41% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
66
76.18
 1.69% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 1853.1 236
76.31
2 1853.2 236
76.31
3 1853.3 236
76.32
4 1853.4 236
76.32
5 1853.5 236
76.41
6 1853.6 236
76.43
7 1853.7 236
76.41
8 1853.8 236
76.43
Source Files on build 1853
Coverage ∆ File Lines Relevant Covered Missed Hits/Line