bigdatagenomics / adam / 1852
77%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 140
Run time 57s
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1852

Pull #1378

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/ceb06eeef386dd41557a83432c44199dc507c339">ceb06eeef<a href="https://github.com/bigdatagenomics/adam/commit/ceb06eeef386dd41557a83432c44199dc507c339">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/193bab45a8dae9abb3f1814355015f33fec4ca62">193bab45a</a>">193bab45a</a><a href="https://github.com/bigdatagenomics/adam/commit/ceb06eeef386dd41557a83432c44199dc507c339"> into 07c1982fb">07c1982fb</a>
Pull Request #1378: Add pipe API in and out formatters for Features

64 of 64 new or added lines in 8 files covered. (100.0%)

4389 of 5729 relevant lines covered (76.61%)

6.12 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
71.43
 -3.57% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/Consensus.scala
1
62.34
 1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
98.11
 -1.89% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
1
85.3
 0.15% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
90.81
 -0.54% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
87.5
 -4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
61.25
 1.25% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
71.15
 1.92% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
2
75.26
 0.77% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
2
81.74
 -0.43% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
2
93.02
 -2.33% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
2
90.1
 2.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
88.14
 -1.69% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
2
80.0
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
3
76.47
 -4.41% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
4
53.8
 -2.34% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Transform.scala
4
79.82
 -2.75% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
4
69.81
 -3.77% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
Jobs
ID Job ID Ran Files Coverage
1 1852.1 243
76.47
2 1852.2 243
76.49
3 1852.3 243
76.47
4 1852.4 243
76.49
5 1852.5 243
76.51
6 1852.6 243
76.49
7 1852.7 243
76.49
8 1852.8 243
76.51
Source Files on build 1852
Coverage ∆ File Lines Relevant Covered Missed Hits/Line