bigdatagenomics / adam / 1846
77%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 132
Run time 2min
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1846

Pull #1427

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/4967ccc807fed08a4e6a88c790290bfb68285d87">4967ccc80<a href="https://github.com/bigdatagenomics/adam/commit/4967ccc807fed08a4e6a88c790290bfb68285d87">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/31769e720cf55b9a582f6d1bee499788483cdc56">31769e720</a>">31769e720</a><a href="https://github.com/bigdatagenomics/adam/commit/4967ccc807fed08a4e6a88c790290bfb68285d87"> into 07c1982fb">07c1982fb</a>
Pull Request #1427: Add cache argument to loadFeatures, additional Feature timers

16 of 16 new or added lines in 4 files covered. (100.0%)

4333 of 5671 relevant lines covered (76.41%)

6.1 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
73.78
 -0.71% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
85.15
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
91.35
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
69.23
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
88.98
 -0.85% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
82.57
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
81.74
 -0.43% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
84.52
 -0.65% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
91.67
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
94.19
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
70.0
 -5.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
2
57.5
 -2.5% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
2
63.64
 2.6% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
2
89.11
 1.98% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
3
76.47
 -4.41% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
3
80.0
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
3
73.58
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
6
73.78
 -0.71% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 1846.1 235
76.25
2 1846.2 235
76.25
3 1846.3 235
76.27
4 1846.4 235
76.34
5 1846.5 235
76.34
6 1846.6 235
76.35
7 1846.7 235
76.27
8 1846.8 235
76.35
Source Files on build 1846
Coverage ∆ File Lines Relevant Covered Missed Hits/Line