bigdatagenomics / adam / 1845
77%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 132
Run time 57s
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1845

Pull #1427

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/1e880d8656255b633f4fb217df5223e361fee250">1e880d865<a href="https://github.com/bigdatagenomics/adam/commit/1e880d8656255b633f4fb217df5223e361fee250">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/dd17834f29276be735101b29b5c06b42e6d1d61e">dd17834f2</a>">dd17834f2</a><a href="https://github.com/bigdatagenomics/adam/commit/1e880d8656255b633f4fb217df5223e361fee250"> into 07c1982fb">07c1982fb</a>
Pull Request #1427: Add cache argument to loadFeatures, additional Feature timers

8 of 8 new or added lines in 4 files covered. (100.0%)

4335 of 5671 relevant lines covered (76.44%)

6.11 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
71.43
 -3.57% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/Consensus.scala
1
87.5
 1.79% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformFeatures.scala
1
85.15
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
95.51
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
91.89
 0.54% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
95.83
 4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
60.0
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
43.64
 1.82% adam-core/src/main/scala/org/bdgenomics/adam/rich/DecadentRead.scala
1
84.52
 -0.65% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
80.0
 -5.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/InterleavedFASTQInFormatter.scala
2
54.97
 -1.17% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Transform.scala
2
73.58
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
93.02
 -2.33% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
2
80.0
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
3
58.44
 -2.6% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
83.49
 0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
3
76.47
 -4.41% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
3
81.74
 -0.43% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
9
87.7
 0.2% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
61
74.81
 0.32% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 1845.1 235
76.32
2 1845.2 235
76.32
3 1845.3 235
76.37
4 1845.4 235
76.37
5 1845.5 235
76.39
6 1845.6 235
76.39
7 1845.7 235
76.3
8 1845.8 235
76.3
Source Files on build 1845
Coverage ∆ File Lines Relevant Covered Missed Hits/Line