bigdatagenomics / avocado / 174
85%
master: 91%

LAST BUILD BRANCH: adam-0.25.0
DEFAULT BRANCH: master
Ran
Jobs 7
Files 21
Run time 1min
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174

Pull #208

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/avocado/commit/<a class=hub.com/bigdatagenomics/avocado/commit/bf417147789e1afce1f0e703de95e0a4c770d455">bf4171477<a href="https://github.com/bigdatagenomics/avocado/commit/bf417147789e1afce1f0e703de95e0a4c770d455">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/avocado/commit/<a class="double-link" href="https://github.com/bigdatagenomics/avocado/commit/45c974d009ef80faa3487d4870d61207fde82b22">45c974d00</a>">45c974d00</a><a href="https://github.com/bigdatagenomics/avocado/commit/bf417147789e1afce1f0e703de95e0a4c770d455"> into de2522d5e">de2522d5e</a>
Pull Request #208: Pass assembly variants to realigner as knowns

36 of 36 new or added lines in 6 files covered. (100.0%)

844 of 991 relevant lines covered (85.17%)

5.96 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
90.77
 -0.76% avocado-core/src/main/scala/org/bdgenomics/avocado/genotyping/BiallelicGenotyper.scala
1
97.3
 -1.31% avocado-core/src/main/scala/org/bdgenomics/avocado/genotyping/Observer.scala
3
72.22
 -7.78% avocado-cli/src/main/scala/org/bdgenomics/avocado/cli/Reassemble.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
90.77
 -0.76% avocado-core/src/main/scala/org/bdgenomics/avocado/genotyping/BiallelicGenotyper.scala
Jobs
ID Job ID Ran Files Coverage
1 174.1 31
85.17
2 174.2 31
85.17
3 174.3 31
85.17
4 174.4 31
85.17
5 174.5 31
85.17
6 174.6 31
85.17
7 174.7 31
85.17
Source Files on build 174
Coverage ∆ File Lines Relevant Covered Missed Hits/Line