46
95%

Ran 13 Feb 2017 07:38PM UTC

Jobs 1

Files 5

Run time 1s

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Build # 46

Build Type

push

travis-ci

Committed by

biologyguy

Commit Message

Overhaul scoring algorithm

- No longer set a default score for single sequences. Treat them like a normal cluster from now on.
- Calculate a raw score that now moves between 0 and ∞
- Include a factor that compares the cluster size to the overall parental size (size of 1/2 parent is set as best)
- Convert fractional raw scores to negative values using log2
- Linearize log transformed values so MCMCMC works properly
- Remove dependence of orphan placement on p-value. The code needs to be removed or refactored.

Run Details

619 of 1270 relevant lines covered (48.74%)

0.49 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	46.1	13 Feb 2017 07:38PM UTC	0	48.74	Travis Job 46.1

Source Files on build 46

Coverage	∆	File	Lines	Relevant	Covered	Missed	Hits/Line

biologyguy / RD-MCL / 46
95%

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Source Files on build 46

biologyguy / RD-MCL / 46 95%

README BADGES x

Markdown

Textile

RDoc

HTML

Rst

Jobs

Source Files on build 46

biologyguy / RD-MCL / 46
95%

README BADGES
x