Ran
|
Jobs
3
|
Files
40
|
Run time
2min
|
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README BADGES
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travis-ci
348 of 348 new or added lines in 19 files covered. (100.0%)
5270 of 7566 relevant lines covered (69.65%)
2.08 hits per line
Lines | Coverage | ∆ | File |
---|---|---|---|
1 |
79.74 |
0.01% | tools/picard.py |
1 |
86.23 |
1.23% | tools/samtools.py |
1 |
27.78 |
0.0% | tools/snpeff.py |
1 |
60.65 |
-0.22% | util/file.py |
2 |
89.78 |
0.57% | taxon_filter.py |
2 |
87.3 |
-0.4% | tools/bwa.py |
2 |
92.41 |
0.0% | tools/kraken.py |
3 |
88.12 |
7.88% | assembly.py |
3 |
34.86 |
-0.25% | ncbi.py |
3 |
53.64 |
-0.9% | tools/__init__.py |
6 |
82.59 |
-0.17% | read_utils.py |
6 |
80.92 |
-2.28% | tools/novoalign.py |
9 |
47.1 |
-0.66% | util/cmd.py |
15 |
68.32 |
-0.7% | intrahost.py |
76 |
72.34 |
-9.53% | metagenomics.py |
Lines | Coverage | ∆ | File |
---|---|---|---|
1 |
79.74 |
0.01% | tools/picard.py |
1 |
68.32 |
-0.7% | intrahost.py |
1 |
71.46 |
-0.03% | illumina.py |
2 |
89.78 |
0.57% | taxon_filter.py |
2 |
72.34 |
-9.53% | metagenomics.py |
4 |
76.92 |
-1.24% | util/misc.py |
4 |
53.64 |
-0.9% | tools/__init__.py |
ID | Job ID | Ran | Files | Coverage | |
---|---|---|---|---|---|
1 | 3468.1 | 40 |
69.56 |
Travis Job 3468.1 | |
2 | 3468.2 | 40 |
69.46 |
Travis Job 3468.2 | |
3 | 3468.3 (TRAVIS_ACCESS_TOKEN_FOR_OTHER_REPO=[secure]) | 40 |
69.04 |
Travis Job 3468.3 |
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|