FAANG / faang-format-transcriber / 32

Builds Branch Commit Type Ran Committer Via Coverage
32 master - Removed debugging output from transcript_id callback - Created a GTF parser to enable properly parsing metadata in this format push lairdm travis-ci pending completion   set done
31 master - Updated documentation to describe '_all' filter macro - Added transcript_id filter to mirror gene_id to transcript_id in gene records to make tools such as RNA-SeqC happy with our GTF format - Updated GTF processor to properly format GTF on writ... push lairdm travis-ci pending completion   set done
30 master Allow streaming of http and gzip files in to the tool push lairdm travis-ci pending completion   set done
29 master - Slight refactor so Callback is a base to inherit from and the demo echo callback is named Echo - Update copyright year push lairdm travis-ci pending completion   set done
28 master - Fixed substitution of mapping entries for config file - Remapping module and example push lairdm travis-ci pending completion   set done
27 master Added filtering of end of reference blocks in gff3, so avoid multiple lines of ### push lairdm travis-ci pending completion   set done
26 master - Allow a 'metadata' ruleset in filters - Metadata is treated like an object for processing - Look-back buffer for the previous written record and the previous processed record push lairdm travis-ci pending completion   set done
25 master - Allow a ruleset called '_all' that will apply to all fields in record - Added a filter callback to do matching, regex and equalities on fields in a record to include or delete that record from the output push lairdm travis-ci pending completion   set done
24 master Allow erasing a record by flagging it as deleted push lairdm travis-ci pending completion   set done
23 master - Fixed behavious for _pre and _post filter behaviour, it wasn't being called - Created first real filter, to remove padding from sequence type objects - Base configurations for unpadding filter push lairdm travis-ci pending completion   set done
22 master More coverage push lairdm travis-ci pending completion   set done
21 master A bit more coverage and testing push lairdm travis-ci pending completion   set done
20 master TODO is done, take it back out push lairdm travis-ci pending completion   set done
19 master - If no input/output file given, use STDIN/STDOUT for reading and writing files - Don't buffer the output when writing - Dummy callbacks should chatter their debugging data to STDERR rather than STDOUT push lairdm travis-ci pending completion   set done
18 master Move coverage push lairdm travis-ci pending completion   set done