zhanglab / psamm / 538

Builds Branch Commit Type Ran Committer Via Coverage
538 command-optional-mm command: Only create a MetabolicModel instance when needed This reduces the start up time for commands that do not use a MetabolicModel instance. Also allows some commands to fail faster since parameters can be checked before the instance is crea... push jonls travis-ci pending completion   set done
537 develop search: Output all compound/reaction properties push jonls travis-ci pending completion   set done
536 develop search: Allow search for compounds in any compartment push jonls travis-ci pending completion   set done
535 develop gapfill: Fix minor flake style issue push jonls travis-ci pending completion   set done
534 develop chargecheck: Add epsilon parameter as a non-zero threshold push jonls travis-ci pending completion   set done
533 develop Merge branch 'gapfill-tests' into develop push jonls travis-ci pending completion   set done
532 lp-namespace lp: Add variable namespaces push jonls travis-ci pending completion   set done
531 develop lp: Allow Expression to be updated in place using +=, -=, *= operators push jonls travis-ci pending completion   set done
530 lp-namespace lp: Allow Expression to be updated in place using +=, -=, *= operators push jonls travis-ci pending completion   set done
529 develop gurobi: Handle non-float numbers correctly push jonls travis-ci pending completion   set done
528 fluxcoupling-mode fluxcoupling: Simplify logic in solve() push jonls travis-ci pending completion   set done
527 develop cplex: Fix failure to set objective to empty expression push jonls travis-ci pending completion   set done
526 gapfill-tests gapfill: Add tests push jonls travis-ci pending completion   set done
525 fluxcoupling-mode Find flux couplings in positive and negative direction (WIP) push jonls travis-ci pending completion   set done
524 fluxcoupling-mode Find flux couplings in positive and negative direction (WIP) push jonls travis-ci pending completion   set done