zhanglab / psamm / 692

Builds Branch Commit Type Ran Committer Via Coverage
692 develop Added new function to psamm.robustness command for FVA Robustness Pull #60 keitht547 travis-ci pending completion   set done
691 robustness-fva Added new function to psamm.robustness command for FVA Robustness push keitht547 travis-ci pending completion   set done
690 develop Added test cases for reaction objects, added test cases for model.tsv file, and edited test cases for model yaml files Pull #58 amenge travis-ci pending completion   set done
689 develop Added function for gene delete to check reactions file and model file for gene associations Pull #58 amenge travis-ci pending completion   set done
688 develop Update glpk solver Pull #33 jonls travis-ci pending completion   set done
687 glpk-solver Update glpk solver push jonls travis-ci pending completion   set done
686 develop Merge pull request #59 from amenge/model-def-doc Docs: Add section on model definition table in file format push jonls travis-ci pending completion   set done
685 develop Docs: Add section on model definition table in file format Pull #59 amenge travis-ci pending completion   set done
684 develop Ignore exception when package version cannot be found This would happen when the psamm package was not installed through setup.py. For some reason, the get_distribution() also failed when using IPython. Since it is not critical to have a version ... push jonls travis-ci pending completion   set done
683 develop Merge branch 'reaction-manipulation' into develop push jonls travis-ci pending completion   set done
682 pathfinder rpair: Better handle reactions with large stoichiometric values push jonls travis-ci pending completion   set done
681 pathfinder Fix overwrite of width variable when computing pen width push jonls travis-ci pending completion   set done
680 pathfinder PathwaysCommand: Remove unused fields push jonls travis-ci pending completion   set done
679 pathfinder Add uniform cost function push jonls travis-ci pending completion   set done
678 pathfinder Use model definition subset push jonls travis-ci pending completion   set done