zhanglab / psamm / 1434

Builds Branch Commit Type Ran Committer Via Coverage
1434 develop sbml: Add tests for parsing properties in notes section Pull #242 web-flow travis-ci pending completion   set done
1433 develop Merge pull request #247 from jonls/sbml-annotations sbml: Allow access to SBML annotations push web-flow travis-ci pending completion   set done
1432 develop sbml: Add conversion functions Pull #242 web-flow travis-ci pending completion   set done
1431 develop sbml: Add tests for xml_notes/xml_annotations Pull #247 web-flow travis-ci pending completion   set done
1430 develop Merge pull request #246 from jonls/sbml-entity-prefix sbml: Add SBML prefix to entity classes push web-flow travis-ci pending completion   set done
1429 develop sbml: Add SBML prefix to entity classes This makes error messages and repr output less confusing by making it clear that these are SBML specific objects. Pull #246 web-flow travis-ci pending completion   set done
1428 develop Merge pull request #245 from jonls/sbml-celementtree sbml: Use cElementTree if possible push web-flow travis-ci pending completion   set done
1427 develop sbml: Use cElementTree if possible It was also considered whether lxml could be used. lxml would have been able to supply additional information, such as line numbers of element definitions. However, lxml has compatibility issues with the way nam... Pull #245 web-flow travis-ci pending completion   set done
1426 develop tests: Fix tests relying on XML data on Python 2.7 On Python 2.7, cElementTree only works with a file that reads bytes. StringIO returns unicode if initialized with a unicode string. This results in cElementTree failing if a unicode string is sup... Pull #242 web-flow travis-ci pending completion   set done
1425 develop sbml: lxml etree has compatibility issues; remove Pull #242 web-flow travis-ci pending completion   set done
1423 develop Merge pull request #243 from jonls/setup-entry-points setup.py: Make excelexport entry point depend on xlsxwriter push web-flow travis-ci pending completion   set done
1422 develop setup.py: Make excelexport entry point depend on xlsxwriter Pull #243 web-flow travis-ci pending completion   set done
1421 develop sbml: Store source line in FileMark Only available when using lxml parser. Pull #242 web-flow travis-ci pending completion   set done
1420 develop Merge pull request #241 from jonls/model-repr native: Provide repr for common classes push web-flow travis-ci pending completion   set done
1419 develop native: Provide repr for common classes This makes it easier to work with these objects interactively and improves error messages in some cases. Pull #241 web-flow travis-ci pending completion   set done