PeteHaitch / methsim / 25

Builds Branch Commit Type Ran Committer Via Coverage
25 master Re-factored SimulatedBS class because a data.table a the parent of an S4 class doesn't play nice :(. push PeteHaitch travis-ci pending completion   set done
24 master Fixed bug in .sampleReadStart() (had forgotten to delete now-unused variable). push PeteHaitch travis-ci pending completion   set done
23 master Completed initial version of simulate,SimulateBSParam-method. Version bump. push PeteHaitch travis-ci pending completion   set done
22 master Fixed bug in .sampleZ() which meant that an empty list was being returned. push PeteHaitch travis-ci pending completion   set done
21 master Removed sort() from .sampleReadStart(). push PeteHaitch travis-ci pending completion   set done
20 master Re-factored .sampleZ() to return a list where element names include the positions of all methylation loci in each read. push PeteHaitch travis-ci pending completion   set done
19 master Added SimulateBSParam class. push PeteHaitch travis-ci pending completion   set done
18 master Finished simulate,SimulateMethylomeParam-method. push PeteHaitch travis-ci pending completion   set done
17 master Wrote foundations for constructing SimulatedMethylome object. push PeteHaitch travis-ci pending completion   set done
16 master Reverted random number generation to the R level (i.e., basically undoes 8d9a5be2a). This greatly simplifies the reproducibility of functions when run in parallel at the R level. push PeteHaitch travis-ci pending completion   set done
15 master Instead of simulating individual chromosome at the C++ level and looping over chromosomes at the R level, now do it all at the C++ level, i.e., simulate Z at the C++ level. push PeteHaitch travis-ci pending completion   set done
14 master Try explicitly setting RNGScope to hopefully avoid segfaults. push PeteHaitch travis-ci pending completion   set done
13 master Merge branch 'master' of https://github.com/PeteHaitch/methsim push PeteHaitch travis-ci pending completion   set done
12 master Moved RNG to C++ from R. push PeteHaitch travis-ci pending completion   set done
11 master Removed call to std::to_string. push PeteHaitch travis-ci pending completion   set done