GavinHuttley / ensembl_tui / 15599683104

Builds Branch Commit Type Ran Committer Via Coverage
15599683104 develop Merge pull request #241 from YapengLang/develop DEV: add the script for reducing genome sequences size for testing purposes push web-flow github
88.05
15598325135 develop Merge pull request #240 from GavinHuttley/develop Major refactor of Genome push web-flow github
88.05
15598225969 develop DEV: updated key to revised test storage push GavinHuttley github
88.05
15572668858 develop Merge pull request #239 from GavinHuttley/develop DEV: update uv github action version push web-flow github
86.76
15572579844 develop DEV: update uv github action version push GavinHuttley github
86.76
15549647435 develop Merge pull request #238 from GavinHuttley/develop Mods for Ensembl 114 and to grab more core mysql tables push web-flow github
86.76
15549488516 develop DEV: address numba x python3.13.4 incompatibility [CHANGED] use the python github action instead of just uv [CHANGED] limit testing to python3.13.3 push GavinHuttley github
86.76
15174477831 develop BUG: fix error in getting gene stableid's from tsv file push GavinHuttley github
86.76
14830141776 develop Merge pull request #235 from GavinHuttley/develop MAINT: keep up with cogent3 changes push web-flow github
86.76
14830061553 develop DEV: fix noxfile push GavinHuttley github
86.76
14607003151 develop Merge pull request #232 from GavinHuttley/develop ENH: address issue #168 push web-flow github
86.79
14606173123 develop ENH: added --ref_genes option to the homologs command, fixes #168 [NEW] option to provide a tab delimited file with a stableid column instead of querying. push GavinHuttley github
86.79
14480821805 develop ENH: add --ref_coords argument to eti alignments, fixes #220 [NEW] ref_coords is a tsv file containing species name, seqid, start, stop and strand. push GavinHuttley github
86.84
14434011830 develop Merge pull request #227 from GavinHuttley/develop MAINT: code tidy push web-flow github
86.97
14433956869 develop API: refactor cli options and callback functions [CHANGED] moved all cli options and callback functions to _cli_option.py push GavinHuttley github
86.97