Ensembl / ensembl-compara / 28

Builds Branch Commit Type Ran Committer Via Coverage
28 release/78 Gap-columns are very likely and should be removed push muffato travis-ci pending completion   set done
27 master Changed the way to remove gaps -REMOVE_GAPS makes more sense than -KEEP_GAPS, and now defaults to: - only remove them if some sequences could not be dumped (the cigar lines are probably not optimal any more) - or if the user has asked for it push muffato travis-ci pending completion   set done
26 release/78 Changed the way to remove gaps -REMOVE_GAPS makes more sense than -KEEP_GAPS, and now defaults to: - only remove them if some sequences could not be dumped (the cigar lines are probably not optimal any more) - or if the user has asked for it push muffato travis-ci pending completion   set done
25 release/78 bugfix: only print each gene once The bug was when writing multiple homologies sharing some genes (e.g. all the orthologues of a query gene), the writer was printing those genes multiple times. push muffato travis-ci pending completion   set done
24 master bugfix: only print each gene once The bug was when writing multiple homologies sharing some genes (e.g. all the orthologues of a query gene), the writer was printing those genes multiple times. push muffato travis-ci pending completion   set done
22 master Be more careful when editing the collections - Do not update a collection twice - Do not update a collection if it hasn't changed push muffato travis-ci pending completion   set done
23 release/78 Be more careful when editing the collections - Do not update a collection twice - Do not update a collection if it hasn't changed push muffato travis-ci pending completion   set done
21 release/78 The second argument in fetch_by_name_assembly() is optional push muffato travis-ci pending completion   set done
20 master The second argument in fetch_by_name_assembly() is optional push muffato travis-ci pending completion   set done
19 master The duplication_confidence_score should also be in the PhyloXML dump push muffato travis-ci pending completion   set done
18 master typo push muffato travis-ci pending completion   set done
17 master Merge branch 'master' of https://github.com/Ensembl/ensembl-compara push emepyc travis-ci pending completion   set done
16 master Finally use the ## syntax for parameters push muffato travis-ci pending completion   set done
15 feature/update_pipeline Removed check for split_genes that was using the tags "_tmp_name". push mateuspatricio travis-ci pending completion   set done
14 feature/update_pipeline Merge branch 'feature/update_pipeline' of ebi:~/ENSEMBL/ensembl-compara into feature/update_pipeline push mateuspatricio travis-ci pending completion   set done