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novikd / VPR_MCMC / 82

Builds Branch Commit Type Ran Committer Via Coverage
82 master Use CompressedGenomeOptionImpl in compressed mode and small fixes 1. Fix distance computation 2. Fix GenomeOption mutation push Dmitry Novik travis-ci-com pending completion
81 master Code cleanup 1. Move interfaces and classes to separate files 2. Leave only biology related classes in phylogeny.common package push Dmitry Novik travis-ci-com pending completion
80 master Add distance computation optimisation for compressed sequences push Dmitry Novik travis-ci-com pending completion
79 master Support compressed genome representation push Dmitry Novik travis-ci-com pending completion
78 master Remove Genome::IsReal push Dmitry Novik travis-ci-com pending completion
77 master Use TestFactory to split test methods into test cases push Dmitry Novik travis-ci-com pending completion
69 master Fix name and surname order in comments push novikd travis-ci-com pending completion
68 master Refactor Taxon class hierarchy push novikd travis-ci-com pending completion
67 nexus Support dumping in NEXUS format push Dmitry Novik travis-ci-com pending completion
66 master Refactor tree package 1. Rename it to network 2. Move util functions and properties from Node.kt to Nodes.kt 3. Move classes which represent evolutionary events to separate package push novikd travis-ci-com pending completion
65 master Refactor Genome classes hierarchy push novikd travis-ci-com pending completion
64 master Refactor execution parameters 1. Create GlobalExecutionSettings singleton 2. Introduce CSVFileLogger push novikd travis-ci-com pending completion
63 master Rename project references push novikd travis-ci-com pending completion
62 master Update README.md push GitHub travis-ci-com pending completion
61 master WIP on NNI push novikd travis-ci-com pending completion