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griffithlab / pVACtools / 1516

Builds Branch Commit Type Ran Committer Via Coverage
1516 figure Pin mhcflurry to version 1.4.3 to maintain compatibility with tensorflow 1.14.0 push 10 Apr 2020 08:51PM UTC susannasiebert travis-ci pending completion   set done
1515 figure Merge 67b5e60f2 into a032e72ee Pull #542 10 Apr 2020 08:35PM UTC web-flow travis-ci pending completion   set done
1514 figure Update main pVACtools workflow figure push 10 Apr 2020 08:34PM UTC susannasiebert travis-ci pending completion   set done
1513 aggregate_report Remove unused method Pull #540 06 Apr 2020 08:41PM UTC web-flow travis-ci pending completion   set done
1512 aggregate_report Remove unused method push 06 Apr 2020 08:39PM UTC susannasiebert travis-ci pending completion   set done
1510 aggregate_report Implement standalone generate_aggregated_report commands Pull #540 06 Apr 2020 06:27PM UTC web-flow travis-ci pending completion   set done
1509 aggregate_report Implement standalone generate_aggregated_report commands push 06 Apr 2020 06:21PM UTC susannasiebert travis-ci pending completion   set done
1507 staging Merge pull request #524 from griffithlab/peptide_length Use the epitope length to determine the flanking sequence length during fasta generation push 27 Mar 2020 06:58PM UTC web-flow travis-ci pending completion   set done
1505 peptide_length Merge pull request #531 from griffithlab/proximal_generate_fasta Accept a phased proximal variants VCF as additional input to the `pvacseq generate_protein_fasta` command push 27 Mar 2020 06:52PM UTC web-flow travis-ci pending completion   set done
1504 staging Merge pull request #532 from griffithlab/vaxrank Remove dependency on VaccinePeptideBase to allow for compatibility with all vaxrank versions push 27 Mar 2020 06:39PM UTC web-flow travis-ci pending completion   set done
1503 staging Merge pull request #533 from griffithlab/agfusion Check that AGFusion .exons.txt file exists, otherwise use .exons.csv file push 27 Mar 2020 06:37PM UTC web-flow travis-ci pending completion   set done
1502 agfusion Check that AGFusion .exons.txt file exists, otherwise use .exons.csv file The exons file ending was updated to .csv in version 1.251 (commit https://github.com/murphycj/AGFusion/commit/9afac87da). This change allows... Pull #533 27 Mar 2020 04:06PM UTC web-flow travis-ci pending completion   set done
1501 agfusion Check that AGFusion .exons.txt file exists, otherwise use .exons.csv file The exons file ending was updated to .csv in version 1.251 (commit https://github.com/murphycj/AGFusion/commit/9afac87da). This change allows... push 27 Mar 2020 03:28PM UTC susannasiebert travis-ci pending completion   set done
1500 vaxrank Remove dependency on VaccinePeptideBase to allow for compatibility with all vaxrank versions Pull #532 27 Mar 2020 03:01PM UTC web-flow travis-ci pending completion   set done
1499 vaxrank Remove dependency on VaccinePeptideBase to allow for compatibility with all vaxrank versions push 27 Mar 2020 02:59PM UTC susannasiebert travis-ci pending completion   set done
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