hall-lab / extract_sv_reads / 66

Builds Branch Commit Type Ran Committer Via Coverage
66 master Notice of replacement with lumpy_filter push web-flow travis-ci pending completion   set done
65 v1.3.0 Merge pull request #12 from hall-lab/nm_tag Add option to ensure the NM tag is available in output files push web-flow travis-ci pending completion   set done
64 master Merge pull request #12 from hall-lab/nm_tag Add option to ensure the NM tag is available in output files push web-flow travis-ci pending completion   set done
63 nm_tag Remove automated tests with clang Pull #12 web-flow travis-ci pending completion   set done
62 nm_tag Remove automated tests with clang push ernfrid travis-ci pending completion   set done
61 nm_tag Reorder compilers in Travis to mask coverage problems with clang Pull #12 web-flow travis-ci pending completion   set done
60 nm_tag Reorder compilers in Travis to mask coverage problems with clang push ernfrid travis-ci pending completion   set done
59 nm_tag Update to htslib-1.9 and add support for libdeflate Pull #12 web-flow travis-ci pending completion   set done
58 nm_tag Update to htslib-1.9 and add support for libdeflate push ernfrid travis-ci pending completion   set done
57 nm_tag Try different name for library push ernfrid travis-ci pending completion   set done
56 nm_tag Update to htslib-1.9 and add support for libdeflate push ernfrid travis-ci pending completion   set done
55 nm_tag Wire up new option for ensure NM output from CRAM files push ernfrid travis-ci pending completion   set done
54 skip_bad_sa Add a section on new flag push web-flow travis-ci pending completion   set done
53 skip_bad_sa Add tests for option to ignore SA tags push ernfrid travis-ci pending completion   set done
52 skip_bad_sa Optionally ignore SA tags with negative positions This happens with early versions of 10X Genomics Lariat aligner. 10X has indicated that these SA tags are from alignments determined to be invalid by Lariat. They shouldn't be reported or used and... push ernfrid travis-ci pending completion   set done