• Home
  • Features
  • Pricing
  • Docs
  • Announcements
  • Sign In

brentp / vcfgo
67%
master: 67%

Build:
Build:
LAST BUILD BRANCH: feature/permit-shorter-sample-filters
DEFAULT BRANCH: master
Repo Added 29 Apr 2015 03:41PM UTC
Files 9
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst

LAST BUILD ON BRANCH feature/permit-shorter-sample-filters
branch: SELECT
CHANGE BRANCH
x
  • No branch selected
  • arena
  • master
  • splitalts

14 Mar 2020 04:13PM UTC coverage: 66.968% (-0.1%) from 67.104%
111

Pull #17

travis-ci

web-flow
Updates parseSample to permit truncated sample values, containing
fewer entries than the FORMAT fields. This is permitted by the
VCF 4.2 spec. It is present "in the wild" in VCFs that were
produced by GATK from gVCFs.
Pull Request #17: Updates parseSample to permit truncated sample values, containing

34 of 34 new or added lines in 1 file covered. (100.0%)

888 of 1326 relevant lines covered (66.97%)

1449.17 hits per line

Relevant lines Covered
Build:
Build:
1326 RELEVANT LINES 888 COVERED LINES
1449.17 HITS PER LINE
Source Files on master
  • List 0
  • Changed 6
  • Source Changed 1
  • Coverage Changed 6
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
111 feature/permit-shorter-sample-filters Updates parseSample to permit truncated sample values, containing fewer entries than the FORMAT fields. This is permitted by the VCF 4.2 spec. It is present "in the wild" in VCFs that were produced by GATK from gVCFs. Pull #17 14 Mar 2020 04:14PM UTC web-flow travis-ci
66.97
110 master add missing test file push 24 Aug 2019 02:17AM UTC brentp travis-ci
67.1
109 master Merge branch 'master' of github.com:brentp/vcfgo push 24 Aug 2019 02:09AM UTC brentp travis-ci
45.06
108 master Merge pull request #14 from CodeLingoBot/rewrite Fix function comments based on best practices from Effective Go push 15 Mar 2019 01:24AM UTC web-flow travis-ci
66.49
107 rewrite Fix function comments based on best practices from Effective Go Signed-off-by: CodeLingo Bot <bot@codelingo.io> Pull #14 15 Mar 2019 01:22AM UTC web-flow travis-ci
66.49
106 master Merge branch 'master' of github.com:brentp/vcfgo push 21 Feb 2019 04:35PM UTC brentp travis-ci
66.49
105 master Merge pull request #13 from revl/handle-sample-parsing-errors Handle sample parsing errors push 13 Feb 2019 10:16PM UTC web-flow travis-ci
66.69
104 handle-sample-parsing-errors Handle sample parsing errors Make sure that the loop that iterates over sample genotypes checks parsing errors for all samples, including those in the middle of the line. Pull #13 12 Feb 2019 11:30PM UTC web-flow travis-ci
66.69
103 feature/parsing-errors Previously, ParseSamples overwrote its errors with the latest error field. So, if the last sample did not have errors, then no errors would be reported. This corrects that by accumulating all errors. Pull #12 15 Dec 2018 09:55PM UTC web-flow travis-ci
65.76
102 master update readme with current usage closes #10 push 14 Dec 2018 02:55AM UTC brentp travis-ci
65.71
See All Builds (76)
  • Repo on GitHub
STATUS · Troubleshooting · Open an Issue · Sales · Support · CAREERS · ENTERPRISE · START FREE · SCHEDULE DEMO
ANNOUNCEMENTS · TWITTER · TOS & SLA · Supported CI Services · What's a CI service? · Automated Testing

© 2025 Coveralls, Inc