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• use-toolIndex
• Bump-version-3.2
• CKrawczyk-patch-1
• V3.3
• add-consensus-text
• add-cors
• add-default-user-id
• add-gunicorn
• add-hpa
• add-new-relic
• add-optics-text-reducer
• add-params-text-reducer
• add-probes
• add-sentry-logging
• add-setup-config
• add-simple-dropdown
• add-text-optics-cluster
• add_sentry_to_prod
• azure-migration
• ba-allow-admins
• better-dropdown-labels
• blank-text-fix
• bugfix/flake8-update
• bump-3.4.4
• bump-cpu-limit
• bump-packages
• bump-to-5.2.1
• bump-version
• bump-version-V3.1
• catch-no-export-errors
• change-text-toeknization
• collaborative_workflow
• csv-utils-update
• data-key
• dependabot/github_actions/actions/checkout-5
• dependabot/github_actions/actions/checkout-6
• dependabot/github_actions/actions/setup-python-6
• dependabot/github_actions/actions/upload-artifact-5
• dependabot/github_actions/github/codeql-action-4
• dependabot/pip/beautifulsoup4-gte-4.8.1-and-lt-4.10
• dependabot/pip/coverage-gte-4.5.3-and-lt-5.2
• dependabot/pip/coverage-gte-4.5.3-and-lt-5.3
• dependabot/pip/coverage-gte-4.5.3-and-lt-5.4
• dependabot/pip/coverage-gte-4.5.3-and-lt-5.5
• dependabot/pip/coverage-gte-4.5.3-and-lt-5.6
• dependabot/pip/coveralls-gte-1.8-and-lt-1.10.1
• dependabot/pip/coveralls-gte-1.8-and-lt-1.11.1
• dependabot/pip/coveralls-gte-1.8-and-lt-1.11.2
• dependabot/pip/coveralls-gte-1.8-and-lt-2.0.1
• dependabot/pip/coveralls-gte-1.8-and-lt-2.1.1
• dependabot/pip/coveralls-gte-1.8-and-lt-2.1.2
• dependabot/pip/coveralls-gte-1.8-and-lt-2.1.3
• dependabot/pip/coveralls-gte-1.8-and-lt-2.2.1
• dependabot/pip/coveralls-gte-1.8-and-lt-3.0.1
• dependabot/pip/coveralls-gte-3.0.0-and-lt-3.0.2
• dependabot/pip/flake8-black-gte-0.1.1-and-lt-0.3
• dependabot/pip/flake8-bugbear-gte-20.1.2-and-lt-20.12
• dependabot/pip/flake8-bugbear-gte-20.1.2-and-lt-21.4
• dependabot/pip/flake8-bugbear-gte-20.1.2-and-lt-21.5
• dependabot/pip/flake8-gte-3.7-and-lt-3.10
• dependabot/pip/flake8-gte-3.7-and-lt-3.9
• dependabot/pip/gitpython-gte-3.0.0-and-lt-3.2
• dependabot/pip/gunicorn-gte-20.0-and-lt-20.2
• dependabot/pip/hdbscan-gte-0.8.20-and-lt-0.8.26
• dependabot/pip/hdbscan-gte-0.8.20-and-lt-0.8.27
• dependabot/pip/hdbscan-gte-0.8.20-and-lt-0.8.28
• dependabot/pip/lxml-gte-4.4-and-lt-4.6
• dependabot/pip/lxml-gte-4.4-and-lt-4.7
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.10.1
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.12.1
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.12.2
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.14.1
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.14.2
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.16.1
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.16.2
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.16.3
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.18.1
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.20.1
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.20.2
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.22.1
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.22.2
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.24.1
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.6.1
• dependabot/pip/newrelic-gte-5.4.0-and-lt-5.8.1
• dependabot/pip/newrelic-gte-5.4.0-and-lt-6.0.1
• dependabot/pip/newrelic-gte-5.4.0-and-lt-6.0.2
• dependabot/pip/newrelic-gte-5.4.0-and-lt-6.2.1
• dependabot/pip/numpy-1.16.4
• dependabot/pip/numpy-1.17.0
• dependabot/pip/numpy-1.17.1
• dependabot/pip/numpy-1.17.2
• dependabot/pip/numpy-1.17.3
• dependabot/pip/numpy-1.17.4
• dependabot/pip/numpy-gte-1.16.3-and-lt-1.19
• dependabot/pip/numpy-gte-1.16.3-and-lt-1.19.6
• dependabot/pip/numpy-gte-1.16.3-and-lt-1.20
• dependabot/pip/numpy-gte-1.20.0-and-lt-1.20.2
• dependabot/pip/numpy-gte-1.20.0-and-lt-1.20.3
• dependabot/pip/packaging-gte-20.1-and-lt-20.10
• dependabot/pip/packaging-gte-20.1-and-lt-20.5
• dependabot/pip/packaging-gte-20.1-and-lt-20.8
• dependabot/pip/packaging-gte-20.1-and-lt-20.9
• dependabot/pip/pandas-0.25.0
• dependabot/pip/pandas-0.25.1
• dependabot/pip/pandas-0.25.2
• dependabot/pip/pandas-0.25.3
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.0.1
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.0.2
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.0.3
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.0.4
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.0.5
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.0.6
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.1.1
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.1.2
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.1.3
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.1.4
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.1.5
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.1.6
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.2.1
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.2.2
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.2.3
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.2.4
• dependabot/pip/pandas-gte-0.24.2-and-lt-1.2.5
• dependabot/pip/panoptes-client-gte-1.1-and-lt-1.3
• dependabot/pip/panoptes-client-gte-1.1-and-lt-1.4
• dependabot/pip/progressbar2-gte-3.39-and-lt-3.51
• dependabot/pip/progressbar2-gte-3.39-and-lt-3.52
• dependabot/pip/progressbar2-gte-3.39-and-lt-3.53
• dependabot/pip/progressbar2-gte-3.39-and-lt-3.54
• dependabot/pip/pyyaml-gte-5.1-and-lt-5.5
• dependabot/pip/recommonmark-gte-0.5.0-and-lt-0.8
• dependabot/pip/requests-gte-2.4.2-and-lt-2.24
• dependabot/pip/requests-gte-2.4.2-and-lt-2.25
• dependabot/pip/requests-gte-2.4.2-and-lt-2.26
• dependabot/pip/scikit-learn-0.21.2
• dependabot/pip/scikit-learn-0.21.3
• dependabot/pip/scikit-learn-0.22
• dependabot/pip/scikit-learn-gte-0.21.1-and-lt-0.22.2
• dependabot/pip/scikit-learn-gte-0.21.1-and-lt-0.22.3
• dependabot/pip/scikit-learn-gte-0.21.1-and-lt-0.23.1
• dependabot/pip/scikit-learn-gte-0.21.1-and-lt-0.23.2
• dependabot/pip/scikit-learn-gte-0.21.1-and-lt-0.23.3
• dependabot/pip/scikit-learn-gte-0.21.1-and-lt-0.24.1
• dependabot/pip/scikit-learn-gte-0.21.1-and-lt-0.24.2
• dependabot/pip/scipy-gte-1.2-and-lt-1.4.2
• dependabot/pip/scipy-gte-1.2-and-lt-1.5.1
• dependabot/pip/scipy-gte-1.2-and-lt-1.5.2
• dependabot/pip/scipy-gte-1.2-and-lt-1.5.3
• dependabot/pip/scipy-gte-1.2-and-lt-1.5.4
• dependabot/pip/scipy-gte-1.2-and-lt-1.5.5
• dependabot/pip/scipy-gte-1.2-and-lt-1.6.1
• dependabot/pip/scipy-gte-1.2-and-lt-1.6.2
• dependabot/pip/scipy-gte-1.2-and-lt-1.6.3
• dependabot/pip/sentry-sdk-flask--gte-0.13.5-and-lt-0.15
• dependabot/pip/sentry-sdk-flask--gte-0.13.5-and-lt-0.16
• dependabot/pip/sentry-sdk-flask--gte-0.13.5-and-lt-0.17
• dependabot/pip/sentry-sdk-flask--gte-0.13.5-and-lt-0.18
• dependabot/pip/sentry-sdk-flask--gte-0.13.5-and-lt-0.19
• dependabot/pip/sentry-sdk-flask--gte-0.13.5-and-lt-0.20
• dependabot/pip/sentry-sdk-flask--gte-0.13.5-and-lt-0.21
• dependabot/pip/sentry-sdk-flask--gte-0.13.5-and-lt-1.1
• dependabot/pip/sphinx-2.2.0
• dependabot/pip/sphinx-2.2.1
• dependabot/pip/sphinx-2.2.2
• dependabot/pip/sphinx-2.3.0
• dependabot/pip/sphinx-gte-2.2.2-and-lt-2.5
• dependabot/pip/sphinx-gte-2.2.2-and-lt-3.1
• dependabot/pip/sphinx-gte-2.2.2-and-lt-3.2
• dependabot/pip/sphinx-gte-2.2.2-and-lt-3.3
• dependabot/pip/sphinx-gte-2.2.2-and-lt-3.4
• dependabot/pip/sphinx-gte-2.2.2-and-lt-3.5
• dependabot/pip/sphinx-gte-2.2.2-and-lt-3.6
• dependabot/pip/sphinx-rtd-theme-gte-0.4.3-and-lt-0.6
• dependabot/pip/werkzeug-gte-0.14-and-lt-0.16.2
• dependabot/pip/werkzeug-gte-0.14-and-lt-1.0.1
• dependabot/pip/werkzeug-gte-0.14-and-lt-1.0.2
• deps-fix
• doc-string-updates
• edit-batch-agg
• edit_gui_install
• faster-question-reducer
• feature/bezier_extractor
• feature/faster-IoU
• feature/hdbscan_change
• feature/new_default_xi
• feature/packaging-testing
• feature/polygon_rasterisation
• feature/polygon_reducer
• feature/pyinstaller
• feature/rasterisation_smoothing_options
• feature/shape_reducer_optimisation
• feature/shapely_optimisation
• feature/update-dependencies
• feature/update_docs
• fix-136
• fix-138
• fix-144
• fix-213
• fix-224
• fix-227
• fix-297
• fix-None-users-text-extractors
• fix-RankWarning
• fix-blank-dropdown-reducer
• fix-gooey
• fix-no-user
• fix-numpy-warnings
• fix-optics-angle
• fix-optics-reducer
• fix-pandas-eval
• fix-shortcut-extractor-reducer
• fix-tess-column-reducer
• fix-tess-nones
• fix-text-subtask
• fix/numpy_in_dictionaries
• fix/numpy_output
• fix/polygon_guide
• fix_pandas_errors
• gh-security-scanning
• git-commit-in-status
• gravity_spy
• i2a-extractor
• increase-timeout
• increase-worker-timeout
• k8s-limits
• kubernetes
• limit-numpy-max-version
• linter-cleanup
• low-consensus-flag
• master
• min-views-transcription
• modify-docker-compose-mounts
• more-tests
• move-and-test-routes
• nan_int
• new-config-test
• nfn-extractor
• nfn-fix-2
• nfn-type-fix
• nfn_extractor_we_dig_bio
• nfn_extractor_we_dig_bio_2021
• optics-fix
• optimise_polygon_rasterisation
• package-updates
• pandas-warnings
• pluck_and_split
• poly-line-text-reducer-update
• python-3.7
• range-all-packages
• remove-shortcut-copied-code
• return-reducer-configs
• revert-303-k8s-limits
• sentry-send-post-payloads
• set-up-gh-actions
• simensta-fix-typo
• subtask-v2.0-patch
• subtask_v2.0
• survey-task-output-fix
• tess-account-for-empty
• tess-column-reducer-as-running
• tess-column-reducer-update
• tess-gold-standard-as-running
• tess-v2-shape-extractor
• text-box-aggregation
• text-editor-add-extractor-index
• text-extractor-v2.0
• time-data
• timeout
• track-gold-standard
• transcription-flagged
• typo-tmpl
• update-doc-string
• update-line-text-extractor
• update-sphinx-config
• update-subtask-2.0-test
• update-text-docs
• update-text-reducer
• update-transcription-task
• updated-packages
• users-in-question-reducer
• v-3.5
• v3.1.0
• v3.2.0
• v3.2.1
• v3.3.0
• v3.4.2
• v3.4.3
• v3.4.4
• v3.4.5
• v3.5
• wedigbio_2025
• wedigbio_2025_fall

Merge 94ed06389 into 285b5b130