vanvalenlab / deepcell-tracking

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LAST BUILD ON BRANCH 0.2.3

branch: 0.2.3

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Build # 93

Build Type

push

travis-ci-com

Committed by web-flow

Commit Message

Add ISBI utility functions and update deprecated networkx functions. (#17)

* `connected_component_subgraphs` is deprecated, using `(G.subgraph(c) for c in connected_components(G))` instead, as suggested by the docs.

* Pin minimum `networkx` version to  2.1 as it is the last version to support python2.7

* Move several ISBI related functions from the notebook to `isbi_utils.py`

* Update setup.py version to `0.2.3` for pending release.

Run Details

1860 of 2980 relevant lines covered (62.42%)

3.03 hits per line