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vanvalenlab / caliban-toolbox
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Repo Added 22 Apr 2020 11:13PM UTC
Files 39
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  • master
  • add_mongo
  • anolytics_upload
  • are_you_mocking_me
  • aws_helper_functions
  • balanced_dataset
  • build_npz_file
  • catch_missing_files
  • cell_size_normalization
  • compressed_saving
  • data_loader
  • data_loader_bugfix
  • dataset_builder
  • dataset_splitter
  • github-actions
  • increased_robustness
  • input_validation
  • label_postprocessing
  • metadata_tracking
  • multiple_labels
  • npz_key_name
  • pad_split
  • readme-update
  • rgb_url
  • set_job_name
  • specify_num_crops
  • streamlined_workflow
  • transfer_job
  • update_example_data
  • update_example_notebook

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Migrate CI/CD from TravisCI to GitHub Actions (#123)

2761 of 3239 relevant lines covered (85.24%)

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Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
409359704 master Migrate CI/CD from TravisCI to GitHub Actions (#123) push 08 Dec 2020 11:04PM UTC GitHub github-actions pending completion  
470 master Add option to split by number of images (#121) * add safeguards for small split sizes * switch from repeat to tile * remove print statement * add option for splitting by image number push 09 Oct 2020 05:50PM UTC web-flow travis-ci-com pending completion  
466 master Adding batch-size to dataset_splitter (#120) * add safeguards for small split sizes * switch from repeat to tile * remove print statement push 05 Oct 2020 09:20PM UTC web-flow travis-ci-com pending completion  
460 master DatasetSplitter (#117) * first pass at dataset_splitter * pep8 * PR suggestions * Update caliban_toolbox/dataset_splitter.py Co-authored-by: willgraf <7930703+willgraf@users.noreply.github.com> * fix sort test, put back strings ... push 02 Oct 2020 10:11PM UTC web-flow travis-ci-com pending completion  
451 master Balanced datasets (#118) * migrate dataset_builder to new branch * switched from lists to arrays for metadata * removed old kwarg * simplify argument name push 04 Sep 2020 08:55PM UTC web-flow travis-ci-com pending completion  
444 master DatasetBuilder and DatasetBenchmarker (#115) * modified train/val/test function * refactored init * switched to loading helper function * loads all experiments and splits data * build dataset function * first pass at DataBuilder ... push 03 Sep 2020 05:06PM UTC web-flow travis-ci-com pending completion  
402 master add support for multiple labels (#111) * add support for multiple labels * moved global variables to settings.py * switched to global variables push 11 Aug 2020 08:25PM UTC web-flow travis-ci-com pending completion  
401 master resize individual images within NPZ (#113) * basic implementation * code cleanup push 11 Aug 2020 08:20PM UTC web-flow travis-ci-com pending completion  
400 master removed unneeded function (#110) push 11 Aug 2020 07:09PM UTC web-flow travis-ci-com pending completion  
399 master Save compressed NPZs (#108) * switch to savez_compressed * switch default dtype for labels push 11 Aug 2020 06:58PM UTC web-flow travis-ci-com pending completion  
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