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• chore/test_custom_cdis_jenkins_lib_code
• chore/test_new_cirrus
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• chore/test_new_parent_img
• chore/test_poetry_dependency_mgmt
• chore/testing_master_branch
• chore/track-x-headers
• chore/track_cache_hit_and_cache_miss
• chore/tweak_fence_create_manage_google_keys
• chore/up_version_for_migration_fix
• chore/update-baseline
• chore/update-deps
• chore/update-deps-test
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• chore/update-passport-logging
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• chore/update_base_img
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• chore/update_packages
• chore/update_pybase_img_denovo
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• chore/update_toml
• chore/upgrade-crryptography-42.0.5
• chore/usync-logs
• chore/verbose
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• clarify-MAX_ACCESS_TOKEN_TTL
• command_line_validation
• copy-feat/alternate-data_upload_bucket
• debug-ras-userinfo
• debug-test
• debug/immport
• debug/pauline
• debug_visas
• dependabot/pip/addict-2.2.1
• dependabot/pip/authlib-0.12.1
• dependabot/pip/authlib-1.6.12
• dependabot/pip/azure-core-1.38.0
• dependabot/pip/certifi-2024.7.4
• dependabot/pip/cryptography-39.0.1
• dependabot/pip/cryptography-43.0.1
• dependabot/pip/dulwich-1.2.5
• dependabot/pip/filelock-3.20.3
• dependabot/pip/flask-3.1.1
• dependabot/pip/flask-cors-5.0.0
• dependabot/pip/flask-cors-6.0.0
• dependabot/pip/h11-0.16.0
• dependabot/pip/httplib2-0.18.0
• dependabot/pip/idna-3.7
• dependabot/pip/jinja2-3.1.5
• dependabot/pip/jinja2-3.1.6
• dependabot/pip/oauth2client-gte-2.0.0-and-lt-5.0
• dependabot/pip/paramiko-2.10.1
• dependabot/pip/protobuf-5.29.5
• dependabot/pip/protobuf-6.33.5
• dependabot/pip/pyasn1-0.6.2
• dependabot/pip/pytest-5.2.1
• dependabot/pip/python-jose-3.4.0
• dependabot/pip/requests-2.32.4
• dependabot/pip/setuptools-78.1.1
• dependabot/pip/urllib3-1.26.19
• dependabot/pip/urllib3-2.6.3
• dependabot/pip/virtualenv-20.36.1
• dependabot/pip/werkzeug-3.0.6
• dependabot/pip/werkzeug-3.1.4
• dependabot/pip/werkzeug-3.1.5
• dependabotfix
• dev/include-ras-access-token-in-session
• dev/include-ras-passport-in-session
• dev/include-ras-userinfo-in-userinfo
• dev/print-ras-passport
• doc/public
• doc/usersync
• doc/useryaml
• docs/alembic
• docs/client_creds
• docs/idp
• docs/local-multi
• docs/openapi
• docs/shib
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• dummy-pr
• feat/DCF-1446-mfa-arborist-policy-assignment
• feat/ENABLE_VISA_UPDATE_CRON
• feat/GPE-1121
• feat/GPE-1121-dockerslim
• feat/GPE-795
• feat/PD-14
• feat/PXP-10776-parent-child-study-authz
• feat/PXP-11366-add-visa-to-ga4gh
• feat/PXP-11366-remove-ga4gh_passport_v1-from-userinfo
• feat/VADC-845
• feat/add-bulk-presigned-url
• feat/add-passports-to-openapi
• feat/addDataUseAgreement
• feat/add_admin_actions_audit_entry
• feat/add_extra_fields_to_admin_user_post
• feat/add_idp_table
• feat/add_new_idp_table
• feat/add_ras_validation_endpt
• feat/add_reactivate_user_endpoint
• feat/add_support_for_soft_delete_user
• feat/al2
• feat/al2_old_dockerfile
• feat/alembic
• feat/api-key-scope
• feat/arborist-dbgap
• feat/arborist-url
• feat/at-hash
• feat/atlas-hacks
• feat/audit
• feat/audit-creds
• feat/audit-sqs
• feat/auth-mapping-userinfo
• feat/authz_provider_arborist
• feat/aws-cognito-claims
• feat/aws-requesterpays
• feat/aws-rp-impr
• feat/backoff
• feat/base_image
• feat/base_image_update
• feat/capitalization
• feat/cert-audit-log
• feat/ci
• feat/cilogon
• feat/clear-user-visas
• feat/cleversafe-url
• feat/client-credential-grant
• feat/client-credentials
• feat/client-rotate
• feat/codeql
• feat/cognito
• feat/community/oidc-client
• feat/config-db-migration
• feat/config_env
• feat/cookies
• feat/cookies-secure
• feat/create_presigned_url_passports
• feat/custom-data-access
• feat/dataUseAgreement
• feat/db-migrate
• feat/dbenvvar
• feat/dbgap-child-studies
• feat/dbgap-options
• feat/dd
• feat/dd-testing
• feat/debug-incommon
• feat/default_session
• feat/delete-flow-authz
• feat/deny
• feat/deprecate_legacy_admin_endpoints
• feat/deps
• feat/dev-3876-add-dbgap-sftp-pubkey-authn
• feat/dockerslim
• feat/download-content
• feat/embedding-vectors
• feat/encode-url
• feat/expire-client
• feat/expires_in
• feat/extend_oauth2_token_refresh
• feat/federated_identities
• feat/folder-structure
• feat/ftp-support
• feat/ga4gh-scope
• feat/ga4gh_drs
• feat/generic-oidc
• feat/github-actions-ci
• feat/google-linking
• feat/google-user-sa
• feat/googlesync
• feat/gunicorn
• feat/handle-access
• feat/helm-integration-tests
• feat/httponlycookies
• feat/id_from_idp
• feat/idp-info
• feat/idp_email
• feat/image-workflow
• feat/incommon
• feat/incommon-updates
• feat/indexd_password
• feat/ip
• feat/ip_audit_logging
• feat/lint-md
• feat/list-g-groups
• feat/login_ras_visa_parse
• feat/logout
• feat/mcrypt-openssl-test
• feat/mcrypt_to_ccrypt
• feat/metrics
• feat/migrations
• feat/modify-scope
• feat/more-backoffs
• feat/multi-passport
• feat/multi_part_bucket_param
• feat/native-docker-build
• feat/nginx-sidecar
• feat/oauth-clients
• feat/oidc-client
• feat/okta
• feat/okta-client
• feat/only_login_activated_users
• feat/only_login_onboarded_users
• feat/optum-okta
• feat/orcid-login
• feat/passport
• feat/passport-authz-mapping
• feat/passport-cache
• feat/passport-exp
• feat/passport-improve-sync-performance
• feat/passport-update-arborist-in-bulk
• feat/passports-cfg
• feat/poetry
• feat/primary_google_service_account
• feat/privacy-policy
• feat/pxp-4787/enable-specifying-allowed-scopes-in-client-create
• feat/py313
• feat/python3.10
• feat/python3.6-buster
• feat/python3.6-buster-tricks
• feat/ras-milestone-3.2-add-visa-parsing-for-data-download
• feat/ras-visas-uinfo
• feat/ras/oidc-handshake
• feat/ras_authn
• feat/ras_expiration_parameter
• feat/ras_global_logout
• feat/ras_logout
• feat/ras_passport_11
• feat/ras_token_management
• feat/read-dbgap
• feat/redis
• feat/reduce_google_iam_updates
• feat/refresh-expires-in
• feat/register
• feat/register-rebase
• feat/release-5.3.3
• feat/remove-travis-for-gh-actions
• feat/remove-veracode
• feat/remove-veracode-config
• feat/remove_metrics_hardcode
• feat/remove_ras_tokens
• feat/remove_role_from_admin_endpoints
• feat/requester-pays
• feat/role-caching-debug
• feat/s3-delete-files
• feat/s3_bucket_regex_unit_test
• feat/satosa-idps
• feat/scoped-token
• feat/sec-scan
• feat/sftp_backoff
• feat/shib_secondary
• feat/smart-arborist-sync
• feat/storage_creds
• feat/storage_expiration
• feat/synapse
• feat/synapse-mod
• feat/synapse-userid
• feat/sync
• feat/sync-clients
• feat/telemetry
• feat/telemetry_backup
• feat/test-authutils
• feat/test-dep-updates
• feat/token_management
• feat/update_admin_decorator
• feat/update_visa
• feat/upload-guid
• feat/use_new_visa_authz
• feat/username-limit
• feat/usersync-bulk-arborist
• feat/usersync_update_authz
• feat/usersync_use_ssh_keys
• feat/usync-emails
• feat/uwsgi_queue_test
• feat/visa-validate
• feat/visa_cron_job
• feat/visa_parse
• feat/visa_sync_loging
• feat/visa_update
• feat_python_unittest
• feature/bucket_info_endpoint
• feature/oidc-oauth-groups-rev2
• fence-3.12
• fence-update
• fence_external_contributor_change1
• fix/3.2.4.x
• fix/EA-usersync
• fix/ENABLED_IDENTITY_PROVIDERS
• fix/PPS-2052
• fix/PXP-10939-bad-references
• fix/PXP-6507
• fix/UPSTREAM_IDP_CACHE
• fix/access-token-polling-doesnt-update-arborist
• fix/ancestry
• fix/anonymous_download
• fix/arborist-timeout
• fix/audit-drs
• fix/audit-sub
• fix/audit-upload
• fix/authorize-idp
• fix/authz-does-not-include-open-access-for-some-users
• fix/authz-signed-urls
• fix/await-usersync
• fix/aws_assume_role_bug
• fix/black
• fix/bucket_name
• fix/bucketregex
• fix/bump-gen3authz-fix-arborist-timeouts
• fix/c999_with_visas
• fix/casc_authz_passports_no_sftp
• fix/change-sa-format
• fix/ci-token
• fix/cirrus-bump
• fix/client-create-output
• fix/client-rotate-access
• fix/create-policy
• fix/dbgap-combination
• fix/dbgap-sync-case
• fix/default-idp
• fix/default-idp-oauth2
• fix/delete-no-prefix
• fix/delete_expired_refresh
• fix/delete_with_no_urls
• fix/deny-consent
• fix/dep
• fix/dep-crypt
• fix/dependency_update
• fix/deps
• fix/deps-branch
• fix/deps-crypt
• fix/docs-link
• fix/docs_on_migration
• fix/dont-google-group-sync-on-s3
• fix/driver-warning
• fix/error-json-response
• fix/escape_warning
• fix/expired-sorting
• fix/fence-cleversafe
• fix/fence-default-config
• fix/fence-idp-jwt-val
• fix/fix_usersync
• fix/flaky-test_user_sync_with_visa_sync_job
• fix/gen3authz-await
• fix/generic-oidc
• fix/get-scopes-old-refresh-tkn
• fix/google-api-client
• fix/google-bucket-create
• fix/google-cron
• fix/google-group-update-single-user
• fix/google-group-updates-preserve-on-single-visa-sync
• fix/google-sa-username
• fix/google_primary
• fix/google_update
• fix/group-sync
• fix/gs-cache
• fix/gs_signed_url_signature_bug
• fix/handle-csv-ordering-with-userinfo
• fix/handle-error-for-blank-guid
• fix/handle_none_string_v2
• fix/handle_ras_visa
• fix/hotfix_pin_authutils4
• fix/httplib2
• fix/idp-choice-does-not-work-when-idp-not-in-LOGIN_OPTIONS-cfg
• fix/idp_logout
• fix/increase-nginx-buffer-size
• fix/jwt-aud
• fix/key_migration
• fix/key_ops-standard
• fix/link_ext_bucket
• fix/login-fails-for-user-with-many-projects
• fix/login-option-error
• fix/login-options
• fix/logout-encoding
• fix/make-region-required-for-S3_Bucket-config
• fix/metrics
• fix/migrate-check
• fix/migration-client-name
• fix/missing-boto
• fix/more-audit-logs
• fix/move_backoff_settings_v2
• fix/multifence-validation
• fix/nginx-magic
• fix/no-plus
• fix/no-token
• fix/no_force_sign
• fix/nonce
• fix/none_string
• fix/oauth2-json
• fix/parsae_urls
• fix/patch-sa
• fix/pentest
• fix/pin_cryptography28_to_avoid_openssl_bug
• fix/pin_gen3authz
• fix/pipeline
• fix/pkey-from-arg
• fix/poetry_idna_dependency
• fix/poetry_no_dev
• fix/populate-idp-for-user-info
• fix/presigned-url-addressing-style
• fix/prom
• fix/prometheus_multiproc_dir
• fix/public-files
• fix/public-region
• fix/python_bump
• fix/python_upgrade
• fix/ras-redirect
• fix/ras/username
• fix/ras_redirect
• fix/ras_test
• fix/ras_url
• fix/redirect
• fix/refactor-bucket-name-and-config
• fix/registration
• fix/registration-digest-method
• fix/relock-poetry
• fix/remove-dead-code
• fix/remove-hardcoded-empty-list-for-ga4gh_passport_v1
• fix/remove_cors
• fix/renew-access-token
• fix/requirements
• fix/resource-deletion
• fix/revoke-policies-on-usersync
• fix/rm-policies-from-grps
• fix/sa-registration-patch
• fix/sa_dry_run
• fix/sa_email
• fix/samesite-cookie
• fix/service-account-limit
• fix/set-expiration-for-storage-access
• fix/set_proper_botocore_dep
• fix/six-dependency
• fix/skip-grant-from-storage-for-google
• fix/split-secret
• fix/ssh
• fix/ssh-logs
• fix/storage_manager_handling
• fix/storage_manager_handling-1
• fix/synapse
• fix/sync-google
• fix/sync-missing-usr
• fix/sync-override
• fix/temp-authlib
• fix/test_cirrus
• fix/timestamp
• fix/token
• fix/token-revoke
• fix/typo
• fix/update-deny
• fix/update_google_signed_url_logic
• fix/upload-url-for-public-file
• fix/user-undefined-revoke-mfa
• fix/user_projects
• fix/userinfo
• fix/username
• fix/usersync-access
• fix/usersync-fail-on-missing-user
• fix/usersync-none
• fix/usersync-update-role
• fix/usersync_read_error
• fix/version
• fix/visa-expiration
• fix/visa_parse_login
• fix/visa_update_cleanup
• haraprasadj-patch-1
• haraprasadj-patch-5
• improve-usersync
• incommon-set
• integration202002
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Build # 25868089857

Build Type

push

github

Committed by PlanXCyborg

Commit Message

Merge https://github.com/uc-cdis/fence into stable

Coverage Stats

8489 of 11307 relevant lines covered (75.08%)

0.75 hits per line