sgkit-dev / bio2zarr

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• tskit-cli
• all-missing-gts
• bed2zarr
• better-logging
• change-default-chunk-size
• change-default-chunksize
• check-named-dimensions-for-vcf-number
• common-writer
• deps-docs
• dimensions-schema
• drop3.9
• extra_tskit_tests
• filter-description
• finalise-tskit
• fix-ci
• fix-ci2
• fix-docs-deploy-trigger
• gh-readonly-queue/main/pr-346-5d9864df79fd67a580c92ec5c3f6f1e710fe6452
• gh-readonly-queue/main/pr-373-33c66a3e8f8e3a52483860ba6faff9265a8cc45d
• gh-readonly-queue/main/pr-374-668017858875ecc7a191af3584313e095920d0e8
• gh-readonly-queue/main/pr-375-598c95fc6f8dc785580fc29d114a0d464356a3e9
• gh-readonly-queue/main/pr-380-d2d41193e7303e6ccb52aa3117f48b7064038c74
• gh-readonly-queue/main/pr-382-794283863362c10108a803c6191f509732e49c13
• gh-readonly-queue/main/pr-383-5d2bd3b5461202be23a06213d9df55d9c9a0f484
• gh-readonly-queue/main/pr-385-587a29e79d90186a626bfd1efe6e8766369806f6
• gh-readonly-queue/main/pr-389-21d0224d118b8140388361503c446c3eebee1634
• gh-readonly-queue/main/pr-390-928965e3f6c6104d1e049dc292546bd1e47f0ed8
• gh-readonly-queue/main/pr-395-6eb88ed787fdf85d553fcea14bfe64a3c8e8f738
• gh-readonly-queue/main/pr-400-b87be4cacce53c39a420e29315d15a8745b9acdd
• gh-readonly-queue/main/pr-406-f6fbb1cf9199efffebaead409c90894736f3c1d3
• gh-readonly-queue/main/pr-408-479ec84123f9ba8022fb1ed5aeaf6fc1a8549fa7
• hypothesis-vcf-release
• increment_schema
• inspect-path-check
• iterate_alleles_genotypes
• jeromekelleher-patch-1
• last-release-batch
• license-docs
• local-alleles-finalise
• main
• merge-header-contigs
• merge-queue
• optional-deps
• packaging-dep
• plink-contigs
• plink-improvements
• reduce-genotype-mem
• reduce-vcf-header
• region-index-chunk-size
• reinstate-test_double_encode_partition
• release-0.1.4
• release-0.1.5
• release-docs-update
• remove-schema-data
• remove-vcf-header
• remove_bed_reader
• rename-icf-mod
• schema-redundancy
• tskit
• uncompressed-vcf
• variant_length
• vcf-field-conversion-bugs
• zarr-python-v3-with-v2-format

Build # 14995164089

Build Type

Pull #374

github

Committed by web-flow

Commit Message

Merge 7c9ff3edd into 668017858

Pull Request Pull Request #374: Add tskit CLI

Run Details

24 of 24 new or added lines in 3 files covered. (100.0%)

2763 of 2815 relevant lines covered (98.15%)

3.93 hits per line