• Home
  • Features
  • Pricing
  • Docs
  • Announcements
  • Sign In

scottclowe / fissa
81%
master: 78%

Build:
Build:
LAST BUILD BRANCH: ci_allow-suite2p-failure
DEFAULT BRANCH: master
Repo Added 03 Oct 2018 08:38PM UTC
Files 8
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst

LAST BUILD ON BRANCH rf_import-read-roi
branch: rf_import-read-roi
CHANGE BRANCH
x
Reset
  • rf_import-read-roi
  • 0.0
  • 0.1.2
  • 0.1.x
  • Suite2Pexample
  • Suite2Pexample3
  • add-stickler-config
  • appveyor_read-roi
  • binder
  • bug_allow-sequences
  • bug_deltaf-matlab-save
  • bug_fixed-seed-on-reroll
  • bug_isinstance-str
  • bug_ncore
  • bug_needlessly-redo-prep
  • bug_numpy-load-pickle
  • bug_pool-context
  • bug_py3-rois
  • bug_roi-offscreen
  • bug_roi-offscreen_0.7
  • bug_roitools-initial-diagonal
  • bug_setup-meta
  • bug_wipe-dowstream-outputs
  • ci_allow-suite2p-failure
  • ci_appveyor
  • ci_appveyor-conda
  • ci_appveyor2
  • ci_codecov-bash
  • ci_docs
  • ci_gha
  • ci_gha-conda
  • ci_improvements
  • ci_jupyter-env-command
  • ci_make-docs
  • ci_nbsmoke
  • ci_no-skip-appveyor
  • ci_osx-needed-except-pr
  • ci_pip-without-conda
  • ci_push-coverage
  • ci_py27
  • ci_py38
  • ci_reduce-jobs
  • ci_reduce-osx-jobs
  • ci_release-extra
  • ci_rename_oldest_deps
  • ci_test-more-things
  • ci_travis
  • ci_travis-fast-finish
  • ci_travis-osx-3
  • ci_travis-osx-4
  • ci_travis-osx-rel
  • ci_trim
  • dev_gitfiles
  • dev_precommit
  • doc+tst_binder-env
  • doc_add-badges
  • doc_add-changelog
  • doc_add-download-counter
  • doc_amend-folder-listing
  • doc_binder
  • doc_binder-old
  • doc_binder-test
  • doc_change-pypi-badge
  • doc_changelog-0.7.1
  • doc_changelog-0.7.2
  • doc_changelog-commit-link-text
  • doc_changelog-reformat
  • doc_ci-badge
  • doc_contrib-tags
  • doc_docfix
  • doc_docstring-tidy
  • doc_doi_lower_case
  • doc_example-scripts
  • doc_fix-docstrings
  • doc_fix-steps
  • doc_howtorelease-updates
  • doc_install-verification-with-ver-num
  • doc_link-to-citing
  • doc_nbviewer
  • doc_release-dist-needs-universal
  • doc_tidyup
  • enh2_python3-compliance
  • enh_functional
  • enh_matlab-save-path
  • enh_no-cache-option
  • jnb_grammar
  • maint_allow-sequences
  • maint_cannonise-version
  • maint_deltaf-smalldata
  • maint_doc_conf
  • maint_init-meta-import
  • maint_ncore1
  • maint_ospathjoin
  • maint_remove-neuropil-lowPassFilter
  • maint_scipy-imsave-dep
  • maint_setup-improvements
  • maint_setup-with-docs
  • maint_setuppy-splitlines
  • maint_tidy-up-things
  • master
  • mnt_ellipse-roi-type
  • mnt_mixed-list-ndarray
  • rel_0.6.5
  • rel_0.7.1
  • rel_0.7.2
  • rel_gpl-v3-license
  • rel_manifest
  • rel_min-deps
  • rel_min-deps-ipython
  • rel_min-deps2
  • rel_min-deps3
  • rel_py3.9
  • rel_python-requires
  • rel_require-past
  • rf_remove-neuropil-lowPassFilter
  • rf_tidy-up
  • sphinx-setup
  • swkeemink/Suite2Pexample
  • tst+bug_flexible-separate-tests
  • tst_add-tests
  • tst_readimagejrois
  • tst_rois2masks-unsupported
  • tst_test-core
  • tst_test-core2
  • tst_test-roitools
  • tst_tidy-up
  • tst_use-subtest
  • v0.0.x
  • v0.1.x

pending completion
354

push

travis-ci

scottclowe
BUG+RF: Int OverFlow on Windows resolved on Py3, utilising read_roi

Resolves the issue/error:
```
  File "C:\projects\fissa\fissa\readimagejrois.py", line 129, in _getfloat
    v = np.int32(_get32())
OverflowError: Python int too large to convert to C long
```
which was seen when trying to run the code on Windows with
AppVeyor, on a freshly compiled from source copy of FISSA instead
of using the pre-compiled version on conda-forge.

This is fixed by using the imagej roi reader from the package
read_roi. However, their implementation only works for Python 3
and not on Python 2.7. Therefore, we use theirs on Python 3 and
our old method on Python 2.7.

208 of 279 branches covered (74.55%)

Branch coverage included in aggregate %.

618 of 738 relevant lines covered (83.74%)

5.66 hits per line

Relevant lines Covered
Build:
Build:
738 RELEVANT LINES 618 COVERED LINES
5.66 HITS PER LINE
Source Files on rf_import-read-roi
  • Tree
  • List 0
  • Changed 6
  • Source Changed 1
  • Coverage Changed 6
Coverage ∆ File Lines Relevant Covered Missed Hits/Line Branch Hits Branch Misses

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
354 rf_import-read-roi BUG+RF: Int OverFlow on Windows resolved on Py3, utilising read_roi Resolves the issue/error: ``` File "C:\projects\fissa\fissa\readimagejrois.py", line 129, in _getfloat v = np.int32(_get32()) OverflowError: Python int too large to convert... push 08 Apr 2020 11:24AM UTC scottclowe travis-ci pending completion  
346 rf_import-read-roi BUG+RF: Int OverFlow on Windows resolved on Py3, utilising read_roi Resolves the issue/error: ``` File "C:\projects\fissa\fissa\readimagejrois.py", line 129, in _getfloat v = np.int32(_get32()) OverflowError: Python int too large to convert... push 08 Apr 2020 10:29AM UTC scottclowe travis-ci pending completion  
319 rf_import-read-roi RF: Make read_roi dependency conditional on Python 3 Since it doesn't work on Python 2, we don't need to use it or require it. push 07 Apr 2020 11:55AM UTC scottclowe travis-ci pending completion  
317 rf_import-read-roi RF: Make read_roi dependency conditional on Python 3 Since it doesn't work on Python 2, we don't need to use it or require it. push 06 Apr 2020 05:24PM UTC scottclowe travis-ci pending completion  
241 rf_import-read-roi BUG+RF: Int OverFlow on Windows resolved on Py3, utilising read_roi Resolves the issue/error: ``` File "C:\projects\fissa\fissa\readimagejrois.py", line 129, in _getfloat v = np.int32(_get32()) OverflowError: Python int too large to convert... push 09 Mar 2020 12:59AM UTC scottclowe travis-ci pending completion  
238 rf_import-read-roi BUG+RF: Int OverFlow on Windows resolved on Py3, utilising read_roi Resolves the issue/error: ``` File "C:\projects\fissa\fissa\readimagejrois.py", line 129, in _getfloat v = np.int32(_get32()) OverflowError: Python int too large to convert... push 08 Mar 2020 07:45PM UTC scottclowe travis-ci pending completion  
193 rf_import-read-roi BUG+RF: Int OverFlow on Windows resolved on Py3, utilising read_roi Resolves the issue/error: ``` File "C:\projects\fissa\fissa\readimagejrois.py", line 129, in _getfloat v = np.int32(_get32()) OverflowError: Python int too large to convert... push 13 Jul 2019 10:36PM UTC scottclowe travis-ci pending completion  
192 rf_import-read-roi rf add back old method and switch based on python version push 13 Jul 2019 08:47PM UTC scottclowe travis-ci pending completion  
187 rf_import-read-roi DOC: Remove readimagejrois from CREDITS.rst push 13 Jul 2019 05:00PM UTC scottclowe travis-ci pending completion  
See All Builds (695)
  • Repo on GitHub
STATUS · Troubleshooting · Open an Issue · Sales · Support · CAREERS · ENTERPRISE · START FREE · SCHEDULE DEMO
ANNOUNCEMENTS · TWITTER · TOS & SLA · Supported CI Services · What's a CI service? · Automated Testing

© 2025 Coveralls, Inc