openvax / varcode
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Merge pull request #245 from openvax/fix-reference-name

Fix reference names from CLI

4 of 4 new or added lines in 3 files covered. (100.0%)

1519 of 1722 relevant lines covered (88.21%)

1.77 hits per line

Relevant lines Covered
1722 RELEVANT LINES 1519 COVERED LINES
1.77 HITS PER LINE
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Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
560 master Merge pull request #245 from openvax/fix-reference-name Fix reference names from CLI push web-flow travis-ci pending completion  
554 master Merge pull request #244 from openvax/add-keyword-aliases-for-deserializing-old-data added keyword aliases to Variant push web-flow travis-ci pending completion  
547 master fix raise_on_error push iskandr travis-ci pending completion  
546 master Merge pull request #242 from openvax/fix-MT-normalization Correct handling of UCSC vs. Ensembl reference genomes push web-flow travis-ci pending completion  
518 master Merge pull request #240 from openvax/fix-effect-ordering-with-empty-sequence default sequence length to 0 if None during effect ordering push web-flow travis-ci pending completion  
509 master small fix to effects push iskandr travis-ci pending completion  
508 master switched from read_table to read_csv push iskandr travis-ci pending completion  
507 master use typechecks push iskandr travis-ci pending completion  
506 master small fixes to Travis, setup, and nucleotides helpers push iskandr travis-ci pending completion  
505 master Merge pull request #237 from openvax/fix-annotation-of-codon-split-between-exons Smarter selection of top priority effect push web-flow travis-ci pending completion  
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