opencobra / cobrapy
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make copies of attributes in reaction (#275)

can be proper objects so copy by reference of e.g. dictionary `notes`
leads to unexpected behaviour as shown in #272

1 of 1 new or added line in 1 file covered. (100.0%)

4107 of 4886 relevant lines covered (84.06%)

2.51 hits per line

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4886 RELEVANT LINES 4107 COVERED LINES
2.51 HITS PER LINE
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Builds Branch Commit Type Ran Committer Via Coverage
911 master make copies of attributes in reaction (#275) can be proper objects so copy by reference of e.g. dictionary `notes` leads to unexpected behaviour as shown in #272 push web-flow travis-ci pending completion  
910 master Adding bounds attribute to reaction (#281) This PR adds a `bounds` attribute to `cobra.Reaction`, which allows bounds to be checked and changed with a single line: ``` model.reactions.PGI.bounds = (0, 1000) ``` ``` >>> model.reactions.P... push hredestig travis-ci pending completion  
909 master fix broken plot on mac osx #1852 avoid 'Fall back to Agg renderer' as suggested here https://github.com/matplotlib/matplotlib/issues/1852 Pull #283 web-flow travis-ci pending completion  
908 master Adding bounds attribute to reaction This PR adds a `bounds` attribute to `cobra.Reaction`, which allows bounds to be checked and changed with a single line: ``` model.reactions.PGI.bounds = (0, 1000) ``` ``` >>> model.reactions.PGI.bounds (0, 1... Pull #281 web-flow travis-ci pending completion  
902 master Adding bounds attribute to reaction This PR adds a `bounds` attribute to `cobra.Reaction`, which allows bounds to be checked and changed with a single line: ``` model.reactions.PGI.bounds = (0, 1000) ``` ``` >>> model.reactions.PGI.bounds (0, 1... Pull #281 web-flow travis-ci pending completion  
901 master Additional summary test improvements This commit adds tabulate as a requirement for summary methods tests. It also uses a pickled pFBA solution for the textbook model to avoid raising errors on different solvers. Pull #278 web-flow travis-ci pending completion  
900 master Fix long-lines issue in design_algorithms.py (#282) This PR will hopefully fix the failing build on master. push phantomas1234 travis-ci pending completion  
899 master Fix long-lines issue in design_algorithms.py This PR will hopefully fix the failing build on master. Pull #282 web-flow travis-ci pending completion  
898 master Additional summary test improvements This commit adds tabulate as a requirement for summary methods tests. It also uses a pickled pFBA solution for the textbook model to avoid raising errors on different solvers. Pull #278 web-flow travis-ci pending completion  
897 master Additional summary test improvements This commit adds tabulate as a requirement for summary methods tests. It also uses a pickled pFBA solution for the textbook model to avoid raising errors on different solvers. Pull #278 web-flow travis-ci pending completion  
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