mantidproject / mantidimaging

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• gh-readonly-queue/main/pr-2605-16e5a2010ba8699f9fa11e2b00292b2ba7134e27
• 1329_Apply_to_all_stacks
• 1619-lock_sidebar_for_spectrum_viewer_window
• 2.4.0
• 2.5.0
• 2.5.0a2.post242-20230309
• 2.5.0a2.post262-20230310
• 2.5.0a4
• 2.5.1
• 2.6.0
• 2.7.0
• 2.7.0b1
• 2.8.0
• 2057-reset_gui_to_default_layout
• 2136-Cancel-Data-Load-on-Load
• 2189-move-tests
• 2189-sphinx-warnings-1
• 2247_issue_and_pr_template
• 2297_refactor_set_roi
• 2297_remove_range_from_model
• 2297_remove_roi_list_model
• 2297_set_new_roi
• 2347-Spectrum-Viewer-Support-Normalising-ROIs-of-Different-Sizes
• 2362-update_operation_window_value_warnings
• 2365-logging-tab
• 2365_logging_settings
• 2366-Warning-Dialog-MI-shutdown-was-Not-Clean-and-Point-to-Logs
• 2368_stack_properties_menu
• 2369-residuals
• 2378-refactor-roi
• 2378-refactor-roi-table-widget
• 2378-refactor-roi-table-widget-2
• 2378-refactor-spectrumviewerview
• 2378-roi-form-widget
• 2378-roi-form-widget-2
• 2378_PART_FOUR_extract_ROIFORMWidget_into_widgets
• 2378_PART_ONE_Extract_ROI_Properties_Table
• 2378_PART_TWO_extract_ROI_table_into_class
• 2383-sepectrum-window-tabs
• 2384-Scaleable-ROI-Properties-View-Widget
• 2385_ROI_drop_down_widget
• 2388_Add-ROI-to-Spectrum-Line-Plot
• 2388_Add_ROI_to_Spectrum_Line_Plot
• 2389_Create-an-Image-View
• 2390-Display-Selected-ROI-within-Image-view
• 2393-Export-Window-Table
• 2394-Create-Dropdown-Menus-to-Select-Export-Format
• 2395-Export-Window-Create/Add-ImageView-(Mapping)-to-Export-Window
• 2397-FITS_Support
• 2412-convergence-optimise
• 2419_tof_3_dcm
• 2420_RITS_export_equal_error
• 2422_Add_ROI_after_export
• 2433-autospec-speedup
• 2436_static_copywrite
• 2438-dev-env-fix
• 2442-spectrum_import_on_build_error
• 2444-ruff-implicit-namespace-package
• 2446-update_developer_guideline_docs
• 2448_live_viewer_spectrum_async
• 2455_RITS_dont_divide
• 2455_RITS_dont_divide-final
• 2456_normalised-image-in-spectrum-view
• 2466-right-click-treeview-error
• 2469_LV_slow_fits
• 2471_spectrum_viewer_roi_threading
• 2472-tabs-not-always-stacked-correctly
• 2473_sample_swicth_error
• 2477-workflow-names
• 2480_live_viewer_eyes_test_independant
• 2483_add_geometry_to_imagestack
• 2484-change-cortilt-calc-to-fill-in-data
• 2484-change-cortilt-to-sync-ui-geometry
• 2485-recon-algos-get-imagestack-geometry
• 2486_spec_plot_update
• 2490_LV_images_modified_intensity_plot
• 2497_LV_Intensity_slow_files
• 2502_wrong_links
• 2503-Save-as-image-in-spectrum-viewer
• 2508-spectum-plots
• 2516_spectrum_plotting_options
• 2523_SV_startup_speedup
• 2525_spectrum_scatter_tests
• 2530-fix-button
• 2531-COR-display-not-updating
• 2532-jenks-nan-safe
• 2542-fix-cor-line
• 2545_overlap_correction_operation
• 2548-fitting-engine
• 2548-fitting-engine-2
• 2548-fitting-engine-tests
• 2556-Handle-NaNs-in-Data-to-Prevent-Gaps-in-Fitting-Plot
• 2561-update-geometry-parameters-in-imagestack
• 2563-Fitting-Display-Fails-to-Update-Properly-After-Adjustments
• 2564-Size-ImageView-in-Fitting-Window
• 2565_operations_tests_overlap_coorection
• 2576-fix-MIPlotItemTest
• 2578-Add-Export-Table
• 2580-update-yapf
• 2582-Doc-tweaks
• 2586-fit-all
• 2588_edit_fitting_init_params
• 2589_overlap_correction_compare_cuberead
• 2593-spectrum-viewer---fitting-tab-sample-image-not-pinned-to-the-top-right-corner-on-window-resize
• 2596_fitting_tab_resolve_units_displayed
• 2599_duplicate_plotdataitem
• 2603_tof_data_type_revision
• 2606-refactoring
• 2606-update-spectrum
• 2608_bragg_edge_fitting_choice
• 2611-stack-properties-show-geometry-information
• 2613_bragg_edge_Santisteban_backend
• 2621-fix-cor-conversion
• 2624_SPDHG_attribute_error
• 2626-Reconstruction-Logging
• 2626-logging-export-files
• 2626-logging-op-final
• 2626-logging-opps
• 2626-spectum-logging
• 2626_clean_up_logging
• 2626_logging_import_files
• 2627-Reconstruction-TypeError-when-running-Minimise-Error
• 2627_slice_type_error
• 2632-add-cor-tilt-properties-to-geometry
• 2638-change-geometry-to-accept-topmost-cor
• 2640-release_notes-pre-commit
• 2642_santisteban_bad_fit_crash
• 2648-Improve-error-when-log-file-doesn't-have-a-header
• 2659_pyinstaller_pkg_resources_depreciation
• 2660-prevent-multiple-threads-spectrum
• 2665_update_astro
• 2668-Updated-scikit-image
• 2672-update-sphinx
• 2674-Update-coverage
• 2676-csv-export
• 2677-roi-colour-change-error
• 2680-update-mypy
• 2682-RuntimeError-in-recolor_links
• 2682_pyright_enable_checks
• 2682_pyright_optional_call_flag
• 2687-Main-Pathlib
• 2687-gpu-util
• 2687-update-pathlib
• 2687_Imagestack_path
• 2687_Manager_pathlib
• 2687_command_Pathlib
• 2687_data_Pathlib
• 2687_eyes_test_Pathlib
• 2687_loader_path
• 2687_op_load_Pathlib
• 2687_saver_path
• 2687_setup_path
• 2687_unit_help_Pathlib
• 2690-exception-worker-thread
• 2693-refactor-180-deg-projection-check
• 2698_spectrum_spinboxes_update_limits
• 2699-resize-fitting-region
• 2700-fit-all-errors
• 2705-refactor-recon-get-stack
• 2707-update-recon-show-event
• 2709-recon-widget-annotations
• 2710-recon-stack-methods-naming
• 2710-recon-update-stack-methods-naming
• 2714_live_viewer_TaskWorkerThread
• 2715_spectrum_thread_mutable
• 2716_cherry_picked_commits
• 2717_update_versions
• 2721-spectrum-region-tof
• 2748-update-gui-test-docs-for-windows
• 2753-bug-loaded-angles-not-on-interface
• 2754-welcomescreen-layout-warnings
• 2759-add-dedicated-geometry-window
• 2763-conda-upload
• 2770-update-cil
• 2777_leak_tracker_object_alive_limit
• 2779-geometry-bug-axis-position-change
• 2783_auto_crop_operations_backend
• 2784_auto_sample_bounding_box
• 2785_system_tests_offscreen
• 2788_reduce_alive_objects_system_loading_tests
• 2791-Allow-resizing-ROI-from-all-corners
• 2795-mon-norm-test-refactor
• 2795-ops-validation
• 2803-ring-remove-bug_1
• 2811-packages-update-cil-25
• 2827-add-3d-conebeam-support
• 2834-geometry-add-new-type-property
• 2839-Caching-spectrum-viewer-refactor
• 2846-add_CIL3DViewer_dependency
• 2848-add_3D_viewer_window
• 2849-embed_widget_in_3d_viewer_window
• 2857-extract-binning
• 2858_prevent_fitting_single_image_stacks
• 2859-base-window-add-question-dialog
• 2864_rits_roi_adjust_spinboxes
• 3.0.0
• DRAFT-ROI-SCALE
• DUMMY_spectrum_scatter_tests
• add_data_types
• automate_author_updates
• automate_compiling_release_notes
• draft_finder_pathlib
• embed_welcome_screen
• ensemble-programming
• flash-wait-for-visible
• geometry-work
• gh-readonly-queue/main/pr-1997-827b2c9df8f1b6ee9708fd42685629339b571b97
• gh-readonly-queue/main/pr-2069-b6087e896e44848c19cbf898f5180df643e6e5af
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Build # 15558543181

Build Type

push

github

Committed by web-flow

Commit Message

Make Jenks and Otsu robust against NaNs in the image  (#2605)

Run Details

2696 of 4135 branches covered (65.2%)

Branch coverage included in aggregate %.

7 of 7 new or added lines in 1 file covered. (100.0%)

10094 of 13727 relevant lines covered (73.53%)

0.74 hits per line