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hammerlab / mhctools
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DEFAULT BRANCH: master
Repo Added 30 Aug 2015 07:42PM UTC
Files 27
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LAST BUILD ON BRANCH master
branch: master
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  • master
  • add-extracted-subsequences-flag
  • add-manifest
  • add-mhcflurry-round2
  • add-netchop
  • add-pan3-to-mhctools
  • add-process-limit-and-extra-flags-to-netmhcpan
  • add-vaxrank-unit-tests
  • bump_version
  • check-min-peptide-lengths-for-netmhc-predictors-and-mhcflurry
  • check-pMHCs-not-just-counts
  • check-peptide-inputs-always
  • cli-multiple-peptides
  • close-input-files-after-filling-them-and-delete-unused-format
  • coveralls
  • fix-collection-and-add-cli
  • fix-mhcflurry-test
  • fix-mhctools-cli
  • fix-mhctools-test
  • fix-netmhc-cons
  • fix-netmhc4-parsing
  • fix-travis
  • fix_tests_iipan
  • fixing-netmhciipan
  • group-by-number
  • iipan_fixes
  • import-mhcflurry-locally
  • mhctools-logger
  • netmhc4
  • netmhc_wrapper
  • netmhcpan-28-fix-diff-lengths
  • no-cleanup-files
  • parsing_cleanup
  • peptide-input-mode
  • percentile-ranks
  • pseudofind
  • timodonnell-patch-1
  • unify-predict-methods
  • use-mhcnames
  • v1.5.0
  • version
  • version-bump

pending completion
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Merge pull request #124 from hammerlab/percentile-ranks

Add support for mhcflurry percentile ranks and custom MHCflurry models dir

18 of 18 new or added lines in 4 files covered. (100.0%)

822 of 915 relevant lines covered (89.84%)

1.79 hits per line

Relevant lines Covered
Build:
Build:
915 RELEVANT LINES 822 COVERED LINES
1.79 HITS PER LINE
Source Files on master
  • List 0
  • Changed 6
  • Source Changed 4
  • Coverage Changed 6
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
446 master Merge pull request #124 from hammerlab/percentile-ranks Add support for mhcflurry percentile ranks and custom MHCflurry models dir push 04 Dec 2017 09:47PM UTC web-flow travis-ci pending completion  
445 master Throw exception on empty (usually unparseable) FASTA file Pull #124 04 Dec 2017 05:55PM UTC web-flow travis-ci pending completion  
437 master version bump Pull #123 04 Nov 2017 12:16AM UTC web-flow travis-ci pending completion  
435 master Merge pull request #122 from hammerlab/fix-netmhc4-parsing sniff for multiple dashes in NetMHC4 output file push 04 Oct 2017 11:00PM UTC web-flow travis-ci pending completion  
434 master merged version Pull #122 04 Oct 2017 10:23PM UTC web-flow travis-ci pending completion  
432 master Merge branch 'master' into fix-netmhc4-parsing Pull #122 04 Oct 2017 12:32AM UTC web-flow travis-ci pending completion  
429 master Merge pull request #118 from hammerlab/netmhcpan-28-fix-diff-lengths NetMHCpan-2.8 fixes push 08 Aug 2017 09:01PM UTC web-flow travis-ci pending completion  
428 master Version bump Pull #118 08 Aug 2017 03:23PM UTC web-flow travis-ci pending completion  
426 master fixing comment Pull #118 07 Aug 2017 11:44PM UTC web-flow travis-ci pending completion  
424 master Grouping peptides by length for input to NetMHCpan-2.8 Pull #118 07 Aug 2017 11:07PM UTC web-flow travis-ci pending completion  
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  • Repo on GitHub
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