hammerlab / cohorts

56%

master: 53%

LAST BUILD ON BRANCH 0.5.0

branch: 0.5.0

CHANGE BRANCH

x

Reset

• 0.5.0
• master
• set-version
• isovar
• test-versioneer
• 0.1.0
• changelog
• df_loader_bug
• arahuja-patch-1
• mw_version
• provenance
• isovar-setup
• fix_bam_path
• load-commenting
• plot-auc
• update_reqs
• kwargs
• refactor_functions
• save-metadata
• polyphen
• polyphen_update
• issue-25
• landscape-plots
• plot_benefit_updated
• issue-44
• varcode-upgrade
• filter-variants
• parse-sample-info
• 0.1.1
• release-0.1.1
• neoantigen-nan
• function_kwargs
• bug_fixes
• pass-ax
• more-axes
• pageant_coverage
• fix_filtering
• round-threshold
• fix-threshold
• expressed_mutations
• summarize_provenance
• pfs_assumption
• no-default-filters
• model
• fix_counting
• modify-setup
• report-coverage
• add-utils
• optional_provenance
• filter_in_cohort
• fix-summary
• filter_fn_pop
• fix-warning-provenance
• output_filter
• load_kallisto
• varcode-fix-ver
• sigs
• fish-ax
• remove-flier
• plot_namedtuple
• fix_travis
• p_star
• response-labels
• default_fn_names
• fisher_fixes
• mask_bug
• logrank_results
• 0.1.2
• survplot-cleanup
• add_survival_legend_label_option
• stat_func
• default_curve_colors
• survival-custom-labels
• fix_threshold_formatting
• float_str
• fprange
• multiple_join
• benefit_configurable
• multi_join
• benefit_function_fix
• plot_correlation
• add-quickstart
• split_load
• 0.2.0
• fix_version
• arahuja-patch-2
• refine_api
• varcode-upgrade-merge
• api_updates
• 0.3.0
• jburos-patch-1
• travis-readme
• 0.4.0
• fix_plot_benefit
• simplify_functions
• count_decorator
• regplot
• 0.4.1
• random_cohort_additions
• random_mhc
• 0.4.2
• variant_import
• develop
• catch-cache-errors
• add-exonic-count
• with-partial-rna
• upgrade_isovar
• 0.5.1
• support_mafs
• 0.5.2
• test-merge-master
• update_functions
• minor_updates
• rug_plot
• fix_filter_cache_warning
• patient_str
• 0.5.3
• p23_compat
• 0.5.4
• update_pageant
• 0.5.5
• tqdm_optional
• drop_py2
• 0.6.0
• pypi_server
• 0.6.1
• 0.6.2
• lambda_df_loaders
• fix-issue-212
• 0.6.3
• add-root-dir
• 0.6.4
• gcloud
• warn-on-vcf-errors
• fix-issue-221
• fix-issue-221-rebase
• feature-plot-by-category
• feature-plot-by-category-2
• gcloud-batch-downloads
• stopiteration_warning
• fix-issue-228
• plot-surv-by-group
• fix-mhcnames-requirement
• median-vaf-missing
• plot-surv-by-strata
• expose-gcloud
• join-on-left
• develop-rcc
• add-get-blob
• add-indel-effects
• fix-expression-errors
• fix-issue-247
• composable-filters-ext
• fix_effects_caching
• 0.7.0
• fix_effects_filtering
• 0.7.1
• variants_dataframe
• fix-cache-dir
• multicohort
• additional_maf
• 0.7.2
• upgrade_mhctools
• 0.7.3

Build # 800

Build Type

push

travis-ci

Committed by web-flow

Commit Message

Merge pull request #165 from hammerlab/variant_import

Add more granular variant specification and other minor changes

Run Details

713 of 1278 relevant lines covered (55.79%)

1.12 hits per line