googlegenomics / gcp-variant-transforms
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Introduce PySam as an alternative parsing library. (#491)

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Builds Branch Commit Type Ran Committer Via Coverage
1873 master Introduce PySam as an alternative parsing library. (#491) push web-flow travis-ci pending completion  
1867 master Enforce region (#527) * Enforce providing --region flag insead of --zone Also adding --region flag to all of our integration tests. Remove zone from all integration json files * First round of comments * Second round of review push web-flow travis-ci pending completion  
1856 master Add a flag to include file in the sample_id hash (#526) * Add a flag to include file in the sample_id hash * Rename flag to samples_span_multiple_files push web-flow travis-ci pending completion  
1852 master <a href="https://github.com/googlegenomics/gcp-variant-transforms/commit/be516c791">Resolve google-resumable-media package conflict (#529) This is casued by the conflict between: * google-cloud-storage 1.23.0 * an... push web-flow travis-ci pending completion  
1842 master Create call info table (#511) Create call info table - Use flag --generate_call_info_table to form the table. - call_info table contains call_id, call_name and file_path. push web-flow travis-ci pending completion  
1839 master Fix our build (#524) There were two issues needed to be fixed: * Replace all `pip install` commands with `python -m pip install` due to a new [cloud-sdk:slim](https://hub.docker.com/r/google/cloud-sdk/) release. * Add `--region` to all integrat... push web-flow travis-ci pending completion  
1815 master Patch release (#520) push web-flow travis-ci pending completion  
1796 master Refactor the code to prepare for the new schema (#512) Refactor the code to prepare for schema version 1. push web-flow travis-ci pending completion  
1791 master refactor file_name to file_path. (#514) push web-flow travis-ci pending completion  
1788 master refactor the code (#513) push web-flow travis-ci pending completion  
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