gem-pasteur / Integron_Finder
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master: 95%

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bneron 
:art: simplify channels between split and merge process

it's need to have only one chanel to transmit file_id, nb of chunks and file
from split to integron_finder

1361 of 1446 relevant lines covered (94.12%)

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1446 RELEVANT LINES 1361 COVERED LINES
2.82 HITS PER LINE
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Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
226 fix_workflow :art: simplify channels between split and merge process it's need to have only one chanel to transmit file_id, nb of chunks and file from split to integron_finder push bneron travis-ci pending completion  
225 fix_workflow :fix: topology if replicon file contain only one seq the test on the number of sequence in replicon file failed push bneron travis-ci pending completion  
220 fix_workflow :sparkles: use input file id to identify where come from inputs this is the first step to support the multiple inputfiles push bneron travis-ci pending completion  
219 fix_workflow Merge branch 'master' of github.com:gem-pasteur/Integron_Finder push bneron travis-ci pending completion  
215 fix_workflow :bug: fix topologie for parralel version for non paralle the behavior is: one replicon -> default topology is circular several replicons -> default topology is linear when I split the replicons in several files containing one replicon the s... push bneron travis-ci pending completion  
211 fix_workflow :bug: fix the reslut output the result directory of integron_merge was copy in directory with the same name so copy the file by hand to have only one level push bneron travis-ci pending completion  
210 fix_workflow try to put result in publishdir push bneron travis-ci pending completion  
201 fix_workflow :pencil2: improve documentaion about parallel_integron_finder push bneron travis-ci pending completion  
200 fix_workflow :sparkles: add support of --promoter-attI for process finder push bneron travis-ci pending completion  
199 fix_workflow :art: use more compact way to write default values push bneron travis-ci pending completion  
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