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exalearn / fast-finetuned-forcefields
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DEFAULT BRANCH: main
Repo Added 01 Mar 2023 01:33PM UTC
Files 23
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  • main
  • add_cov
  • ani1x
  • calc_cuda
  • eval-models
  • finetune
  • fix-ci
  • fix_mctbp
  • gs_only
  • mofs
  • mp2_finetune
  • revert-26-schnet-with-pbc
  • robust_mctbp
  • schnet-with-pbc
  • tamm_ase
  • tamm_init
  • to_toml

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Fine-tune models using MP2 data (#38)

* Switch to using Perlmutter, small basis set pretasks

* Add notebooks to start fine-tuning on MP2

* Go back to dft guesses, update plots

* Add notebooks for comparing different pre-trained models

* Add ability to run MPI NWChem tasks

* Add NWChem to the build environment

* Fix the directory in which a calculation runs

Will enable restarts because the same inputs will be directed to the
same directory

* Update for Perlmutter

* Finish perlmutter port, add restarting, multiple jobs

* Update the comparison notebooks

* Allow sampling to be placed on GPU nodes

We cannot run single-node sampling jobs on the same executor
as multi-node NWChem runs

* Remove vestiges of older Colmena

1. Colmena records proxy stats for us
2. It also measures the runtimes

* Fix a few backwards conditional statements

* Change how we choose block sizes

* Finish the MP2//AVTZ initial set

* Removed outdated environment file

* Add environment for Peralmutter GPU

* Reset the command after execution

* Add multi-node support to run.py

* Add redis configuration file

* Fix Parsl configuration

1. Ensure srun gives Parsl workers access to GPUs
2. Properly active environment (source not conda)

* Fix node count logic, argparse choices

* Regular scaling works fine

* Fix lockup where simulation tasks stop processing

They were waiting to allocate more resources to sampling,
which won't become available until the current round of sampling
finishes.

* Run configuration used on perlmutter

* Test training with only MP2 data

982 of 1097 relevant lines covered (89.52%)

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Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
5867624077 main Fine-tune models using MP2 data (#38) * Switch to using Perlmutter, small basis set pretasks * Add notebooks to start fine-tuning on MP2 * Go back to dft guesses, update plots * Add notebooks for comparing different pre-trained models ... push 15 Aug 2023 01:42PM UTC web-flow github pending completion  
5867630027 main Initial work on forcefields for MOFs (#39) * Put in the READMEs * Script for running optimization tests on Polaris * Relax lattice constants too * Add notebooks for evaluating scaling * Add the figure files * Add convergence notebo... push 15 Aug 2023 01:38PM UTC web-flow github pending completion  
5589359843 main MP2 Finetuning Runs for Perlmutter (#37) * Switch to using Perlmutter, small basis set pretasks * Add notebooks to start fine-tuning on MP2 * Go back to dft guesses, update plots * Add notebooks for comparing different pre-trained models... push 18 Jul 2023 03:37PM UTC web-flow github pending completion  
5490394309 main Prepare for fine-tuning on MP2 data (#36) * Switch to using Perlmutter, small basis set pretasks * Add notebooks to start fine-tuning on MP2 * Go back to dft guesses, update plots * Add notebooks for comparing different pre-trained model... push 07 Jul 2023 08:55PM UTC web-flow github pending completion  
5338213812 main Switch to pyproject.toml (#34) * Switch to pyproject.toml * Update how we install test deps push 21 Jun 2023 07:47PM UTC web-flow github pending completion  
5338225271 main Initial support for MP2 via TAMM (#35) * Reorganize the run directories * Change TAMMs units to Ha * Stub for TAMM benchmarking * Add template file * Got my unit conversion backwards :lol: * Restore better cutoffs * Updates t... push 21 Jun 2023 07:46PM UTC web-flow github pending completion  
5223758727 main Add ASE calculator interface for TAMM (#33) * Add ASE calculator interface for TAMM * Add the tamm module * Test all available levels * Ignore error messages in coverage push 09 Jun 2023 04:07PM UTC web-flow github pending completion  
5222812047 main Explore finetuning from TTM to DFT (#32) * Add notebook for finetuning better TTM model * Allow both DFT and TTM for sampling * Allow offloading DFT to HPC via Globus Compute * Add support for MD as sampling method * Store the momenta... push 09 Jun 2023 02:21PM UTC web-flow github pending completion  
5138105656 main Initial work on dehydrogenation problem (#31) * Move notebooks for hydronet into a subdirectory * Be able to fix a maximum size * Add function for setting reference energies * Add example notebook for SchNet with PBCs * Add ability to... push 31 May 2023 10:13PM UTC web-flow github pending completion  
4929488587 main Merge pull request #26 from exalearn/schnet-with-pbc push 09 May 2023 07:12PM UTC GitHub github pending completion  
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