• Home
  • Features
  • Pricing
  • Docs
  • Announcements
  • Sign In

catmaid / CATMAID
45%
master: 45%

Build:
Build:
LAST BUILD BRANCH: dev
DEFAULT BRANCH: master
Repo Added 06 May 2015 02:06PM UTC
Files 111
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst

LAST BUILD ON BRANCH maintenance/2018.11.09
branch: maintenance/2018.11.09
CHANGE BRANCH
x
Reset
  • maintenance/2018.11.09
  • 2016.05.26
  • 2016.08.09
  • 2016.08.12
  • 2016.08.26
  • 2016.09.01
  • 2016.10.18
  • 2016.11.04
  • 2016.12.16
  • 2017.01.19
  • 2017.02.16
  • 2017.03.16
  • 2017.05.17
  • 2017.07.28
  • 2017.10.02
  • 2017.12.07
  • 2018.02.16
  • 2018.04.15
  • 2018.07.19
  • 2018.11.09
  • 2019.06.20
  • 2020.02.15
  • albert-dev
  • bug/gha-devserver
  • cclauss-patch-1
  • ci-test-ordering
  • counts
  • csv-bug
  • debug
  • dependabot/npm_and_yarn/dompurify-2.2.6
  • dependabot/npm_and_yarn/elliptic-6.5.3
  • dependabot/npm_and_yarn/elliptic-6.5.4
  • dependabot/npm_and_yarn/glob-parent-5.1.2
  • dependabot/npm_and_yarn/handlebars-4.7.7
  • dependabot/npm_and_yarn/hosted-git-info-2.8.9
  • dependabot/npm_and_yarn/json-pointer-0.6.1
  • dependabot/npm_and_yarn/lodash-4.17.19
  • dependabot/npm_and_yarn/lodash-4.17.21
  • dependabot/npm_and_yarn/prismjs-1.21.0
  • dependabot/npm_and_yarn/prismjs-1.23.0
  • dependabot/npm_and_yarn/y18n-4.0.1
  • dependabot/pip/django/django-3.0.12
  • dependabot/pip/django/django-3.0.14
  • dependabot/pip/django/djangorestframework-3.11.2
  • dependabot/pip/django/pillow-8.1.1
  • dependabot/pip/django/pillow-8.2.0
  • dependabot/pip/django/pyyaml-5.4
  • dev
  • dev-synapse-fractions
  • dev-test
  • docker-update-test
  • docs-catpy
  • feature/circuit-simulation2
  • feature/focal-reqs
  • feature/gh-actions
  • feature/moving-least-squares-transform
  • feature/scipy1.5
  • feature/setuptools
  • features/1210-3d-viewer-improve-removal-speed
  • features/1817-travis
  • features/1817-travis-clean
  • features/3d-viewer-connector-buffer-geometry
  • features/3d-viewer-history-animation
  • features/3d-viewer-line-width
  • features/3d-viewer-multi-layer-z-sections
  • features/3d-viewer-pick-complete-skeleton
  • features/3dviewer-ortho-scale-bar
  • features/64-bit-concept-ids
  • features/admin-user-importer
  • features/asgi
  • features/better-http-status-codes-on-error
  • features/binary-node-query
  • features/boss-tile-source
  • features/catglancer
  • features/celery-periodic-tasks-default
  • features/chrome-headless-tests
  • features/ci-improve-pypy-config
  • features/ci-xenial
  • features/class-instance-trigram-index
  • features/connector-related-table-fixes
  • features/default-update-radius-shortcut
  • features/django-1.11
  • features/django-1.9
  • features/django-2.1
  • features/django-2.2
  • features/django-3
  • features/docker-initial-projects
  • features/docker-update
  • features/exporter-annotation-based-removal-update
  • features/firefox-css-fixes
  • features/fix-coveralls-reports
  • features/fix-tests
  • features/graph-widget-svg-illustrator-fix
  • features/h2n5-tile-source
  • features/history-tables
  • features/history-tables-store-original-txid
  • features/ignore-gui-tests-without-credentials
  • features/ilastik-integration
  • features/image-block-layer
  • features/importer-tests
  • features/importexportui
  • features/improve-version-representation
  • features/interval-based-alpha-shapes
  • features/label-stack-manager
  • features/landmark-layer
  • features/landmark-matching-mapping
  • features/landmarks
  • features/landmarks-fix-num-min-matches
  • features/landmarks-remote-projects
  • features/layout-menu
  • features/limit-node-updates-on-tracing-actions
  • features/link-widget
  • features/mls-transformations
  • features/more-remote-widgets
  • features/multi-swc-import
  • features/nblast
  • features/neuroglancer-precomputed-image-block-source
  • features/neuroglancer-skeleton
  • features/neuron-history-widget
  • features/new-static-api-doc
  • features/node-index-update
  • features/node-list-cache
  • features/node-list-cache-for-zoom
  • features/node-query-epoch-datetime
  • features/node-query-grid-cache
  • features/numpy-update
  • features/oauth2
  • features/overlay-action-suspend
  • features/parallel-grid-cache-update
  • features/persistent-tracing-color-settings
  • features/pixi-update
  • features/pointer-events
  • features/postgres-11
  • features/postgres-12
  • features/postgres-requirements-update
  • features/pypy-on-travis
  • features/pypy-requirements-update
  • features/pypy-update
  • features/pypy3.6
  • features/python-3-support
  • features/python-3-support-trusty
  • features/python-3.7
  • features/python-3.8
  • features/quick-merge-mode
  • features/request-headers
  • features/sampler-correct-intervals
  • features/selenium-tests
  • features/simple-trakem2-xml-based-node-update
  • features/skeleton-summary-table
  • features/stats-summary-table
  • features/streaming-cursor-spatial-query
  • features/synapse-plot-with-plotly
  • features/tests-pypy-5.7.1
  • features/tile-layer-flip-y
  • features/travis-celery-tests
  • features/travis-ci/pip-cache
  • features/travis-mypy
  • features/travis-ubuntu-18.04
  • features/update-coverage-parameters
  • features/update-manage.py-location
  • features/update-manage.py-location-coveralls
  • features/upgrade-karma
  • features/upgrade-networkx
  • features/use-map-in-overlay
  • features/vim-bookmarks
  • features/volume-hackathon
  • features/webvr
  • features/xlsx-export-connectivity-matrix
  • fix-ci-tests
  • fix-docker-unshallow
  • fix-karma-tests
  • fix-node-query-cache-table
  • fix-selenium-tests-no-change
  • fix-tests
  • fix-travis-postgres
  • fix/export-connectors
  • graph-columns
  • graph-columns-2
  • hotfix/meta-annotation-fulljoin
  • issue-templates
  • issues/1085-treenode-connector-spatial-query
  • issues/1282-pixi-layer-blend-mode-mode-and-filter
  • issues/1710-explicit-downsample-factors
  • issues/1710-explicit-downsample-factors-squash
  • issues/1902-pixi-webgl-check
  • issues/847-stack-mirrors
  • issues/847-stack-mirrors-squash
  • issues/ci-fix-pypy
  • issues/debug-autonomous-node-selection
  • issues/docker-build-100
  • issues/fix-event-context-off
  • issues/fix-geos-version-parsing
  • issues/fix-graph-widget-node-filters
  • issues/fix-pypy-ci-test
  • issues/fix-pypy-ci-tests
  • issues/fix-python-3.5-annotations
  • issues/fix-pyyaml-vulnerability
  • issues/fix-transaction-log-tests
  • issues/fix-travis
  • issues/n5-image-block-layer-robustness
  • issues/pypy-python-3.8
  • issues/python3-git-version
  • issues/sampler-constrain-interval-expansion
  • issues/webgl-error-test
  • maintenance/2016.04.18
  • maintenance/2016.08.12
  • maintenance/2016.08.26
  • maintenance/2016.09.01
  • maintenance/2016.10.18
  • maintenance/2016.11.04
  • maintenance/2016.12.16
  • maintenance/2017.01.19
  • maintenance/2017.02.16
  • maintenance/2017.03.16
  • maintenance/2017.05.17
  • maintenance/2017.07.28
  • maintenance/2017.10.02
  • maintenance/2017.12.07
  • maintenance/2018.02.16
  • maintenance/2018.04.15
  • maintenance/2018.07.19
  • maintenance/2018.07.19+skeleton-api-change
  • maintenance/2019.06.20
  • maintenance/2020.02.15
  • master
  • merges/travis-clean
  • migration-fix
  • new-find-path-skeletons
  • non-arrow-markers
  • pg-9.6-compat
  • pg12-debug
  • py39
  • refactor/review-widget-rable-creation
  • refactor/review-widget-table-cration
  • refactor/review-widget-table-creation
  • refactors/build-on-1604
  • refactors/tile-source
  • refactors/webgl-tracing-overlay
  • release/2016.04.18
  • release/2016.05.25
  • release/2016.05.26
  • release/2016.08.09
  • release/2016.08.12
  • release/2016.08.26
  • release/2016.10.18
  • release/2016.11.04
  • release/2017.01.19
  • release/2017.02.16
  • release/2017.03.16
  • release/2017.07.28
  • release/2017.10.02
  • release/2017.12.07
  • release/2018.02.16
  • release/2018.04.15
  • release/2018.07.19
  • release/2018.11.09
  • release/2019.06.20
  • release/2020.02.15
  • remove-segmentation-tool
  • render-service-fix
  • replace-imagemagick
  • sphinx-qol
  • stable
  • test-fix
  • travis-python-3.6
  • travis/fix-pg-10
  • travis/matrix-test-pg96
  • travis/slimerjs-0.10.0
  • vagrant
  • vagrant-1804
  • vagrant-focal
  • vagrant-populate
  • vagrant-update
  • wip-importexportui

pending completion
5942

push

travis-ci

tomka
Add missing main dependency: sphinx

Sphinx was so far only installed as a documentation dependency as part
of `requirements-doc.txt`. Sphinx needs to be part of this file still,
because we use it to install everything that is needed to build the
documentation on readthedocs.org. However, we also need Sphinx to run
CATMAID, because in the module `custom_rest_swagger_googledoc` we import
it and use it in `get_googledocstring()`, which in turn is used to
render our API documentation. Thanks to @perlman for the pointer!

7670 of 16868 relevant lines covered (45.47%)

1.35 hits per line

Relevant lines Covered
Build:
Build:
16868 RELEVANT LINES 7670 COVERED LINES
1.35 HITS PER LINE
Source Files on maintenance/2018.11.09
  • List 0
  • Changed 4
  • Source Changed 0
  • Coverage Changed 4
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
5942 maintenance/2018.11.09 Add missing main dependency: sphinx Sphinx was so far only installed as a documentation dependency as part of `requirements-doc.txt`. Sphinx needs to be part of this file still, because we use it to install everything that is needed to build the ... push 13 May 2019 02:47PM UTC tomka travis-ci pending completion  
5863 maintenance/2018.11.09 Widget construction: respect all panels when updating content height So far only the height of the button panel was taken into account when computing a new height for the widget content. If the widget content was already exceeding the available h... push 26 Mar 2019 03:26PM UTC tomka travis-ci pending completion  
5862 maintenance/2018.11.09 Admin: fix storing user group updates Apparently some Django update disallowed storing m2m relations directly through an assignment. The set() method has to be used instead. push 26 Mar 2019 02:08AM UTC tomka travis-ci pending completion  
5815 maintenance/2018.11.09 Fix deletion of reviewed treenodes If a treenodes is refrenced from another table, the SQL used to delete the treenode is currently not able to cascade this deletion to those foreign key references. We currently don't define treenode foreign key ... push 27 Feb 2019 04:29PM UTC tomka travis-ci pending completion  
5807 maintenance/2018.11.09 Tracing overlay: prevent mixing connector types when creating new links The CATMAID front-end assigns types to connectors based on its links to treenodes (or uses the default connector type), e.g. 'synaptic' or 'desmosome'. When creating new link... push 21 Feb 2019 05:58PM UTC tomka travis-ci pending completion  
5804 maintenance/2018.11.09 Tracing overlay: use default connector type for connectors w/o links A connector generally has no type, but based on existing relations CATMAID will give each connector a type to suggest reasonable options when creating additional links. If there... push 21 Feb 2019 05:07PM UTC tomka travis-ci pending completion  
5802 maintenance/2018.11.09 User front-end model: fix error when doing an update of a particular name Sanja Jasek discovered a problem with the anonymous user trying to retrieve information on specific users. The anonymous user isn't allowed to retrieve user information by ... push 21 Feb 2019 04:37PM UTC tomka travis-ci pending completion  
5771 maintenance/2018.11.09 Upgrade Django from v1.11.18 to v1.11.20 Django 1.11.x before 1.11.19, 2.0.x before 2.0.11, and 2.1.x before 2.1.6 allows Uncontrolled Memory Consumption via a malicious attacker-supplied value to the django.utils.numberformat.format() function. ... push 14 Feb 2019 02:47PM UTC tomka travis-ci pending completion  
5717 maintenance/2018.11.09 Admin: fix data view edit form Thanks to @unidesigner for making me aware of this. The render API for widgets changed in Django 1.11 and the extended data view config widget (that also displays additional help text) wasn't updated until now. It w... push 02 Feb 2019 06:43PM UTC tomka travis-ci pending completion  
5687 maintenance/2018.11.09 Upgrade jsTree from v3.3.1 to v3.3.7 This fixes mainly the use of a deprecated feature: document.registerElement(). There don't seem to be any breaking changes with how we use jsTree at the moment. Fixes catmaid/CATMAID#1839 push 29 Jan 2019 03:25AM UTC tomka travis-ci pending completion  
See All Builds (4802)
  • Repo on GitHub
STATUS · Troubleshooting · Open an Issue · Sales · Support · CAREERS · ENTERPRISE · START FREE · SCHEDULE DEMO
ANNOUNCEMENTS · TWITTER · TOS & SLA · Supported CI Services · What's a CI service? · Automated Testing

© 2025 Coveralls, Inc