biocore
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mg-scripts
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job_script_fix
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job_script_fix
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TestFastQCJob
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add-tests
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add_assay_type
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add_callback
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add_fastq_annotation
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add_prep_info_file_gen
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add_replicate_method
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add_sif
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add_tellread
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amplicon_fixes
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amplicon_support2
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amplicon_support_hotfixes
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assay_type_verifier
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catch_all_zero_length
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changes-from-qiita-rc-10.2023
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config
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confirm_array_jobs_status
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copy_sequences
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dep_fix
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dynamic_gres
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errors_update
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extra_validation
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fastq_description_update
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fastqc
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fastqc_update
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filename_fix
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fix-sacct-array
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fix_katharoseq
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fix_read_csv
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fix_trimmed
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fixes-after-deploy-03.25
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gen-prep-fix
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get_sample_names
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get_sample_names_fix
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instrument_support
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job-arrays
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kraken2
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kraken2_revisited
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latest_fixes
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latest_updates
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loader_fix
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log_parsing
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master
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metatranscriptomic_fix
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min_bytes=3.1K
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more_updates
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movi_day
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movi_updates
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multi_configuration
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multiqc_fix
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multiqc_inputs_fix
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multiqc_inputs_fix_re
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multiqc_update
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name_superset_fix
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new_polling_code
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nu_qc
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nu_qc_update
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output_filepaths
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perf_updates
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prepend_run_id_to_blanks
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prod_change
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prod_hotfixes
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prod_testing
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prod_updates
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production_fixes
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qiita_id
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qiita_id_fix
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qsub_fix
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rc_updates
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readd-dev_rm-SLURM_ARRAY_TASK_MIN
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real_world_test_fixes
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refactor
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refactor_output_folder
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refactor_outputs
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remove_default_profile
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remove_fastqc_node_constraint
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remove_vestigial
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replicate_validation_fix
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reserved_word_check
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restart_support
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revert-38-multiqc_inputs_fix
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rta_complete_check
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sample_sheet_names_fix
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sample_sheet_validation_hotfix
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sample_tracking
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sample_tracking3
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save-adapter-filtered
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seqcount_support
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seqpro
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seqpro_fix
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seqpro_refactor
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setup_update
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shm-se-changes
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sif_update
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slurm-1
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squeue_fixes
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support_plugin_refactoring
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support_replicates
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test_deploy
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test_updates
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testing_fixes
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trimmed_sequences_fix
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underscores_to_dots
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update_pipeline
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update_using_callback
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updates
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validation_fix
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wallclock_time_update
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with_pipeline_package
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wk-fixes
CHANGE BRANCH
x
-
job_script_fix
- TestFastQCJob
- add-tests
- add_assay_type
- add_callback
- add_fastq_annotation
- add_prep_info_file_gen
- add_replicate_method
- add_sif
- add_tellread
- amplicon_fixes
- amplicon_support2
- amplicon_support_hotfixes
- assay_type_verifier
- catch_all_zero_length
- changes-from-qiita-rc-10.2023
- config
- confirm_array_jobs_status
- copy_sequences
- dep_fix
- dynamic_gres
- errors_update
- extra_validation
- fastq_description_update
- fastqc
- fastqc_update
- filename_fix
- fix-sacct-array
- fix_katharoseq
- fix_read_csv
- fix_trimmed
- fixes-after-deploy-03.25
- gen-prep-fix
- get_sample_names
- get_sample_names_fix
- instrument_support
- job-arrays
- kraken2
- kraken2_revisited
- latest_fixes
- latest_updates
- loader_fix
- log_parsing
- master
- metatranscriptomic_fix
- min_bytes=3.1K
- more_updates
- movi_day
- movi_updates
- multi_configuration
- multiqc_fix
- multiqc_inputs_fix
- multiqc_inputs_fix_re
- multiqc_update
- name_superset_fix
- new_polling_code
- nu_qc
- nu_qc_update
- output_filepaths
- perf_updates
- prepend_run_id_to_blanks
- prod_change
- prod_hotfixes
- prod_testing
- prod_updates
- production_fixes
- qiita_id
- qiita_id_fix
- qsub_fix
- rc_updates
- readd-dev_rm-SLURM_ARRAY_TASK_MIN
- real_world_test_fixes
- refactor
- refactor_output_folder
- refactor_outputs
- remove_default_profile
- remove_fastqc_node_constraint
- remove_vestigial
- replicate_validation_fix
- reserved_word_check
- restart_support
- revert-38-multiqc_inputs_fix
- rta_complete_check
- sample_sheet_names_fix
- sample_sheet_validation_hotfix
- sample_tracking
- sample_tracking3
- save-adapter-filtered
- seqcount_support
- seqpro
- seqpro_fix
- seqpro_refactor
- setup_update
- shm-se-changes
- sif_update
- slurm-1
- squeue_fixes
- support_plugin_refactoring
- support_replicates
- test_deploy
- test_updates
- testing_fixes
- trimmed_sequences_fix
- underscores_to_dots
- update_pipeline
- update_using_callback
- updates
- validation_fix
- wallclock_time_update
- with_pipeline_package
- wk-fixes
coverage: 78.632% (+4.2%) from 74.433%
github
GitHub
272 of 422 branches covered (64.45%)
Branch coverage included in aggregate %.
80 of 96 new or added lines in 7 files covered. (83.33%)
1016 of 1216 relevant lines covered (83.55%)
2.51 hits per line
Relevant lines Covered
1216
RELEVANT LINES
1016
COVERED LINES
2.51
HITS PER LINE
Source Files on job_script_fix
Recent builds
| Builds | Branch | Commit | Type | Ran | Committer | Via | Coverage |
|---|---|---|---|---|---|---|---|
| 1483571378 | job_script_fix | Merge 4d75d02b5 into 533cca62b | Pull #53 | GitHub | github |
78.63 |
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| 1483506073 | job_script_fix | Merge 09bd3d399 into 533cca62b | Pull #53 | GitHub | github |
77.92 |
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| 1464887368 | job_script_fix | Merge e197b72c3 into 533cca62b | Pull #49 | GitHub | github |
74.29 |
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| 1464704144 | job_script_fix | Merge d3cef670d into 533cca62b | Pull #49 | GitHub | github |
74.32 |
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| 1463756832 | job_script_fix | Merge 5bb5ff25a into 533cca62b | Pull #49 | GitHub | github |
73.92 |
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