biocommons / biocommons.seqrepo

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Build # 148

Build Type

push

travis-ci

Committed by afrubin

Commit Message

Closes #36: Remove Biopython dependency
* Added PyCharm files to .gitignore
* Removed biopython from requirements
* Added a simple FASTA file generator function
* Use the provided FASTA generator instead of biopython's SeqIO. All tests pass.
* FASTA iterator returns None if no records were found
* added FastaIter tests, minor fixes
* added a multi-line FASTA file test
* removed argument from return in generator
(Commit collapsed by Reece)

Run Details

20 of 20 new or added lines in 3 files covered. (100.0%)

492 of 874 relevant lines covered (56.29%)

1.19 hits per line