angelolab / toffy

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LAST BUILD ON BRANCH ark_stitching_link

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• ark_stitching_link
• rosetta_matrix
• rosetta_workflow
• qc_watch
• vscode-git-ignore
• main
• watcher
• rosetta_bonus
• no-contrast-check
• coreg_save
• install-instructions
• polish-watcher
• toffy_workflow_description
• tiled_region_name
• streak-detection
• tma_dup
• tiled_region_overlay
• rename_fov_folders
• improve-watcher-tests
• MPH_plots
• rosetta_modifications
• watcher_docs
• import_error
• watcher-chaining
• rename_warning
• run-callbacks
• time_axis
• rosetta_simplification
• mph_norm_workflow
• moly_points_option
• bug-112-moly-skip
• python_version_docs
• pin_ark
• find_moly_fovs
• MPH_histograms
• streak_parameter_adjustments
• reformat_run_dirs
• extract_bin_notebook
• sync_package_updates_with_ark
• detailed_panel_description
• json.helper.func
• small_fixes
• json_helper_functions
• implement_json_helper_funcs
• split_run_file
• check_voltage
• update_QC
• qc_metrics_violin_plots
• fov_process_order
• normalize_dtype
• image_stitching
• qc_doc
• normalize_doc
• qc_qol
• nb1_improvements
• 3b_and_3d_documentation
• nb4a_improvements
• git_install_instructions
• optical_img_mibiscope_png_doc
• empty_json
• MPH_description
• watcher_hidden_files
• adjust_min_tma
• coreg_path_fix
• pipeline_flowchart
• readme_dir_structure
• panel_conversion
• pipeline_flowchart_3e
• ds_store_ignore
• tma_doc
• tma_oob_check
• normalize_arg_fix
• panel_cols
• rosetta_files
• run_metrics_saving
• tma_no_moly
• callback-building-speedup
• copy_notebooks
• notebook_cleaning
• github-actions-from-template
• tempfile_error
• rosetta_stitching_fix
• readme_discussion
• toffy_notebook_fixes
• stitch_no_run_file
• rosetta_mat_path
• rosetta_ignore_stitched_folder
• list_moly_json_encoding
• load_panel_cols
• readme_flowchart
• normalization_checks
• rosetta_chan_39
• copy_files_error
• workshop_links
• pulse_heights_callback
• max_img_size_subdir
• v0.1.0
• toffy_setup_video_fix
• canceled_run
• convert_utf
• optimization/compressed_tiffs
• next_release_v0.1.1
• v0.1.1
• tmi/image_utils
• tmi_for_env
• stitch_by_shape
• tmi/utils
• voltage_skip_empty
• rosetta_dtype
• tmi/notebooks
• dependencies/scikitlearn
• rosetta_folder
• remove_mibitracker
• rosetta_v2_add
• inter_callback
• zero_panel
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Build # 1985

Build Type

Pull #278

travis-ci-com

Committed by web-flow

Commit Message

Merge 58044a334 into 3fbe93478

Pull Request Pull Request #278: Add link in notebooks for the ark tiled Image Stitching script

Run Details

2161 of 2274 relevant lines covered (95.03%)

0.95 hits per line