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angelolab / cell_classification
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Repo Added 25 Aug 2022 10:41PM UTC
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  • main
  • annotated_dataset
  • app_notebook
  • data_aug
  • data_prep
  • data_prep_update
  • deepcell_app
  • dset_composition
  • eval
  • eval_splits
  • evaluation_script
  • filter_dataset
  • hpc_dev
  • manual_training_loop
  • multi_dataset
  • nuc_mem_dataset
  • plot_utils
  • prepare_example
  • promix_naive
  • segmentation_naming_convention
  • training_script
  • training_tweaks

28 Aug 2023 04:33PM UTC coverage: 80.919%. Remained the same
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1398 of 1699 relevant lines covered (82.28%)

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Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
6002459992 main Update README.md push 28 Aug 2023 05:29PM UTC web-flow github
80.92
6002267392 main Prediction notebook (#65) Merged this branch prior to the presentation. push 28 Aug 2023 05:08PM UTC web-flow github
80.92
4918187170 main Application notebooks (#59) push 08 May 2023 06:13PM UTC GitHub github
81.43
4790382711 main Coverage Reporting Fix (#58) push 24 Apr 2023 07:42PM UTC GitHub github
81.43
317 main Added scripts for .tfrecord generation of tonic_annotated and mskcc pancreas datasets. (#52) Co-authored-by: Noah F. Greenwald <noahfgreenwald@gmail.com> push 10 Mar 2023 10:35PM UTC web-flow travis-ci-com pending completion  
310 main Fixed evaluation_script argparser and model_builder multi-dataset sampling (#51) push 09 Mar 2023 11:27PM UTC web-flow travis-ci-com pending completion  
300 main Adding more control and train/val/test set composition (#50) push 27 Feb 2023 07:34PM UTC web-flow travis-ci-com pending completion  
295 main Multi dataset (#48) push 20 Feb 2023 10:13PM UTC web-flow travis-ci-com pending completion  
272 main Added worst n plots and heatmaps of per cell precision, recall, spec, f1 (#47) push 27 Jan 2023 05:47PM UTC web-flow travis-ci-com pending completion  
257 main Add nuclei, membrane channel and tissue type attribute to tfrecord dataset generation (#46) push 17 Jan 2023 06:40PM UTC web-flow travis-ci-com pending completion  
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