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WGS-TB / MentaLiST
55%
master: 55%

Build:
Build:
LAST BUILD BRANCH: mentalist_v0.1
DEFAULT BRANCH: master
Repo Added 16 Feb 2018 05:34PM UTC
Files 4
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LAST BUILD ON BRANCH v0.2.2
branch: v0.2.2
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  • v0.2.2
  • add-cgmlst-options-v0.1
  • bugfix/64-enterobase-downloads-0.1
  • bugfix/70-mentalist-tree-few-samples
  • bugfix/cgmlst-download-0.1
  • bugfix/cgmlst-download-zip
  • bugfix/full-name-enterobase-dbs
  • bugfix/mentalist-distance-r-dependency
  • edam-operation
  • feature/conda-travisci
  • feature/data-manager-remove-db
  • feature/distance-matrix-output-tsv
  • feature/mentalist-distance
  • feature/nj-tree-tool
  • feature/upgma-tree-tool
  • fix-galaxy-mlst-scheme
  • fix-galaxy-mlst-scheme_v0.2
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  • mentalist_v0.1
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  • v0.1.8
  • v0.1.9
  • v0.2.1
  • v0.2.4

pending completion
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Fork an unzip process to decompress downloaded cgMLST alleles (#30)

* Fork an unzip process to decompress downloaded cgMLST alleles

* Rewrite download_cgmlst_scheme() to handle new zip scheme files from cgmlst.org

* Tidy up comments and fix total locus count

* Fix test data filenames for L. pneumophila

* Add unzip as a conda dependency

* variable n_locus not used

463 of 837 relevant lines covered (55.32%)

681137.82 hits per line

Relevant lines Covered
Build:
Build:
837 RELEVANT LINES 463 COVERED LINES
681137.82 HITS PER LINE
Source Files on v0.2.2
Detailed source file information is not available for this build.

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
93 v0.2.2 Fork an unzip process to decompress downloaded cgMLST alleles (#30) * Fork an unzip process to decompress downloaded cgMLST alleles * Rewrite download_cgmlst_scheme() to handle new zip scheme files from cgmlst.org * Tidy up comments and fix... push 29 Mar 2018 12:59AM UTC web-flow travis-ci pending completion  
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