VDBWRAIR / bio_bits
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LAST BUILD ON BRANCH parallel_blast
branch: parallel_blast
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necrolyte2 
using --round-robin which should tell parallel to split the file NINST ways. Also normalized parallel arguments into a static list

5 of 5 new or added lines in 1 file covered. (100.0%)

663 of 788 relevant lines covered (84.14%)

2.5 hits per line

Relevant lines Covered
788 RELEVANT LINES 663 COVERED LINES
2.5 HITS PER LINE
Source Files on parallel_blast
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
169 parallel_blast using --round-robin which should tell parallel to split the file NINST ways. Also normalized parallel arguments into a static list push necrolyte2 travis-ci pending completion  
167 parallel_blast -p is the short arg for --threads not -t push necrolyte2 travis-ci pending completion  
165 parallel_blast changed from 100k to 10 because it was not breaking up files that were smaller than 100k push necrolyte2 travis-ci pending completion  
163 parallel_blast fixes an issue where you could not supply quoted args to --blast_options such as -outfmt push necrolyte2 travis-ci pending completion  
160 parallel_blast changed from -a to --daa because the way command is printed does not handle short args. TODO push necrolyte2 travis-ci pending completion  
158 parallel_blast small blurp about how diamond is being run push necrolyte2 travis-ci pending completion  
156 parallel_blast Fixed compat import issue for python3 push necrolyte2 travis-ci pending completion  
154 parallel_blast Removed unnecessary print statements push necrolyte2 travis-ci pending completion  
151 parallel_blast Closes #53. Also ensures that optional arguments are not duplicate of static args. parallel_diamond improvements push necrolyte2 travis-ci pending completion  
141 parallel_blast removing test test_fail push necrolyte2 travis-ci pending completion  
See All Builds (178)