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IGVF-DACC / igvf-ui
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LAST BUILD BRANCH: IGVF-3027-methyl-reads-no-ref
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Repo Added 25 Feb 2022 10:28PM UTC
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  • IGVF-1511-lab-embed-award-name
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  • IGVF-1514-add-alias
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  • IGVF-1519-add-reverse-link
  • IGVF-1521-table-report-links
  • IGVF-1522-add-indexer-deduplicator
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  • IGVF-1532-analysisset-tables
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  • IGVF-1535-audit-valid-chroms
  • IGVF-1536-audit-markdown
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  • IGVF-1539-cleanup-audit-cat
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  • IGVF-1550-fix-uniquekey
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  • IGVF-1554-demultiplexed-from
  • IGVF-1556-fix-orf-id-search
  • IGVF-1557-facet-group-reset
  • IGVF-1558-curatedset-description
  • IGVF-1560-table-status
  • IGVF-1564-update-predictionset-page
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  • IGVF-1567-reverse-link-analysis
  • IGVF-1568-rm-variant
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  • IGVF-1572-audit-parent-single-child
  • IGVF-1575-mutagenesis-gRNA-audit
  • IGVF-1576-update-cypress-facet-test
  • IGVF-1579-fix-sequencing-kit-audit
  • IGVF-1582-update-biosample-pages
  • IGVF-1585-update-file-pages
  • IGVF-1586-aux-set-timestamp
  • IGVF-1587-analysis-set-auxiliary-sets
  • IGVF-1590-add-miseq-seq-kit
  • IGVF-1593-scroll-top-fix
  • IGVF-1594-add-vista-collection
  • IGVF-1599-audit-upload-status
  • IGVF-1601-2-linked-lists-to-tables
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  • IGVF-1602-rm-readout
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  • IGVF-1604-audit-unexpected-inputs
  • IGVF-1606-predictionset-embeddings
  • IGVF-1607-sequencing-kits
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  • IGVF-1610-fix-markdown-html
  • IGVF-1611-hide-internal-action-audit
  • IGVF-1612-stacked-linked-status
  • IGVF-1613-barcode-element-mapping
  • IGVF-1616-add-growth-media
  • IGVF-1617-collapsible-lists
  • IGVF-1618-platform-ui-update
  • IGVF-1621-derived-fastq-unique-key
  • IGVF-1622-orf-add-lab-award
  • IGVF-1624-raw-data-no-analysis
  • IGVF-1625-no-derived-from
  • IGVF-1626-accessory-data-availability
  • IGVF-1627-fix-seq-kit-audit
  • IGVF-1629-seq-kit-typo
  • IGVF-1633-multiplexed-requests
  • IGVF-1634-age-in-hours
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  • IGVF-1636-activating-agent
  • IGVF-1637-sample-modification-2
  • IGVF-1638-help-updates
  • IGVF-1639-schema-graph-link
  • IGVF-1641-audit-page-sorting
  • IGVF-1642-sequencing-library-types
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  • IGVF-1646-fix-file-key
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  • IGVF-1666-pooled-in-array
  • IGVF-1668-audit-table-sorting
  • IGVF-1669-fix-nonplural-schema
  • IGVF-1671-user-email-no-spaces
  • IGVF-1672-analysisset-page
  • IGVF-1674-refer-to-concrete
  • IGVF-1675-remove-analysis-audit
  • IGVF-1676-fix-cached-model
  • IGVF-1678-add-content-type-reference
  • IGVF-1679-fix-1602-upgrade
  • IGVF-1681-model-file
  • IGVF-1682-add-restricted-bucket
  • IGVF-1683-fix-inconsistent-parent
  • IGVF-1684-remove-biosample-nih
  • IGVF-1686-software-version-req
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  • IGVF-1689-list-summaries
  • IGVF-1691-modelfile-pages
  • IGVF-1693-upgrade-fix
  • IGVF-1694-rename-fold-over
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  • IGVF-1696-crispr-modification
  • IGVF-1700-page-editor-lists
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  • IGVF-1714-fix-facet-test-failure
  • IGVF-1716-auxiliary-set-table-fix
  • IGVF-1716-compare-dev
  • IGVF-1720-seq-kit-new-enum
  • IGVF-1721-external-image-url
  • IGVF-1722-analysis-step-version-schema
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  • IGVF-1724-add-props-CLS-SGE
  • IGVF-1725-perturb-seq-outputs
  • IGVF-1726-donor-summary
  • IGVF-1727-file-summary
  • IGVF-1728-ont-term-summary
  • IGVF-1729-software-summary
  • IGVF-1730-award-lab-src-summ
  • IGVF-1731-marker-gene-orf-feat-summ
  • IGVF-1732-pred-set-doc-pub-summary
  • IGVF-1735-gene-list-reverse-link
  • IGVF-1736-abstract-modification
  • IGVF-1741-move-socials-right-corner
  • IGVF-1742-white-box
  • IGVF-1743-modify-tables-analysis-set
  • IGVF-1744-prediction-inputs
  • IGVF-1746-batch-dl-npm
  • IGVF-1747-mset-set-status-auxset
  • IGVF-1748-add-workflow-version
  • IGVF-1750-targeted-genes-mset
  • IGVF-1754-summary-image-page
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  • IGVF-1756-CRISPR-NTRs-audit
  • IGVF-1757-rename-barcode-seq
  • IGVF-1758-more-file-set-facets
  • IGVF-1760-add-enum-model-set
  • IGVF-1761-add-enum-for-tabular-file
  • IGVF-1762-add-gene-model-set
  • IGVF-1764-add-kox1
  • IGVF-1765-more-file-facets
  • IGVF-1766-add-enum-prediction-set
  • IGVF-1767-add-enum-document-type
  • IGVF-1768-fix-signal-files
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  • IGVF-1771-fix-prettier-css
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  • IGVF-1775-update-read-length
  • IGVF-1776-rm-library-construction
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  • IGVF-1778-udated-desc
  • IGVF-1782-base-modification
  • IGVF-1783-chart-page
  • IGVF-1783-circleci-debug
  • IGVF-1784-fileset-table-report-npm
  • IGVF-1786-audit-targeted-genes
  • IGVF-1787-audit-no-step-version
  • IGVF-1789-remove-pub-ids
  • IGVF-1790-fix-submission-sample
  • IGVF-1792-change-gene-to-genes
  • IGVF-1794-meas-set-summary-crispr
  • IGVF-1795-add-enums
  • IGVF-1797-rename-auxset-enums
  • IGVF-1798-add-external-image
  • IGVF-1799-add-HT-recruit
  • IGVF-1801-add-dataset-summary-endpoint
  • IGVF-1802-audit-missing-CLS
  • IGVF-1803-prod-info-dependency
  • IGVF-1804-audit-missing-pat
  • IGVF-1807-publication-updates-npm
  • IGVF-1816-adding-new-user
  • IGVF-1817-add-target-gene-prediction
  • IGVF-1819-released-links
  • IGVF-1820-no-scroll-facets
  • IGVF-1821-update-ic-audit
  • IGVF-1822-auxiliary-set-files
  • IGVF-1825-no-result-facets
  • IGVF-1826-prime-editing
  • IGVF-1829-crispr-treatment-upgrade-fix
  • IGVF-1830-file-tables-update
  • IGVF-1831-st-outputs
  • IGVF-1832-control-type
  • IGVF-1833-combine-audit-auxiliary
  • IGVF-1836-sso-setup
  • IGVF-1837-filter-embeddable-chart
  • IGVF-1839-add-status-to-user
  • IGVF-1840-require-pfat
  • IGVF-1841-warning-control
  • IGVF-1841-warning-sandbox-staging
  • IGVF-1842-content-type-line-break
  • IGVF-1844-content-type-defs
  • IGVF-1845-admin-only-reference
  • IGVF-1846-add-new-content-type-enum
  • IGVF-1848-add-auxset-enum
  • IGVF-1849-orf-gene-update
  • IGVF-1853-add-analysis-step-types
  • IGVF-1854-library-construction-platform
  • IGVF-1855-add-CRISPR-assays
  • IGVF-1856-embed-file-sets
  • IGVF-1857-construct-library-set-facets
  • IGVF-1858-singular-seq-kit
  • IGVF-1859-meas-pat-summary
  • IGVF-1860-add-company
  • IGVF-1861-new-property-displays-npm
  • IGVF-1863-upgrade-precommit-version
  • IGVF-1865-240821-ont-update
  • IGVF-1866-upgrade-cdk-version
  • IGVF-1868-home-page-updates
  • IGVF-1869-fix-audit-child-sample
  • IGVF-1870-cell-type-annotation
  • IGVF-1872-pheno-feature-qualifier
  • IGVF-1873-facet-terms-characters
  • IGVF-1873-staging-test
  • IGVF-1878-update-sso-login-portal-address
  • IGVF-1880-audit-no-multiome-size
  • IGVF-1881-file-set-type-defs
  • IGVF-1882-sample-summary
  • IGVF-1883-update-analysis-set-npm
  • IGVF-1884-audit-no-tab-specs
  • IGVF-1885-inherit-protocols
  • IGVF-1886-reverse-link
  • IGVF-1887-audit-no-barcodes
  • IGVF-1889-fix-CRISPR-summary
  • IGVF-1890-model-file-set-summary
  • IGVF-1891-report-dl-button-npm
  • IGVF-1894-file-summary
  • IGVF-1895-generic-page-crash
  • IGVF-1897-image-pages
  • IGVF-1898-scroll-to-top-clicks
  • IGVF-1900-new-lab-aliases
  • IGVF-1902-counts-norm-step
  • IGVF-1903-missing-MPRA-design
  • IGVF-1906-fix-multiome-audit
  • IGVF-1907-add-tabular-file-content-type
  • IGVF-1908-sample-facets
  • IGVF-1909-download-tsv-page
  • IGVF-1910-add-document-type
  • IGVF-1911-inconsistent-samp-as-errors
  • IGVF-1914-calculate-taxa
  • IGVF-1915-starr-seq
  • IGVF-1917-restrict-file-CLS
  • IGVF-1919-display-properties
  • IGVF-1921-external-input-data
  • IGVF-1922-genes-loci
  • IGVF-1926-embedded-file-props
  • IGVF-1928-multiplexed-sample
  • IGVF-1929-calculate-samples
  • IGVF-1930-biosample-qualifier
  • IGVF-1931-castaneus-enums
  • IGVF-1932-transcriptome-ref
  • IGVF-1934-add-funtional-assay-mechanism
  • IGVF-1935-add-vamp-pref-assay
  • IGVF-1936-change-ic-audit-mux
  • IGVF-1938-add-model-param
  • IGVF-1939-add-barcode-map-aux-sets
  • IGVF-1940-audit-page
  • IGVF-1942-prevent-uppercase-emails
  • IGVF-1943-collapsible-tables
  • IGVF-1944-report-link-correction
  • IGVF-1947-file-set-embed-crash
  • IGVF-1948-tabular-file
  • IGVF-1949-expand-version
  • IGVF-1950-matrix-dimension
  • IGVF-1953-embed-platform
  • IGVF-1954-file-graph
  • IGVF-1955-sequencing-platform-embed
  • IGVF-1956-add-VarChAMP-collection
  • IGVF-1957-imaging-assay
  • IGVF-1958-variant-localization
  • IGVF-1959-long-facet-group-titles
  • IGVF-1961-matrixfile-dimension-update
  • IGVF-1963-add-external-props
  • IGVF-1964-derived-manually
  • IGVF-1965-nopanel-breadcrumb
  • IGVF-1966-fileset-facets
  • IGVF-1976-varchamp-collection-icon
  • IGVF-1977-peak-quantification
  • IGVF-1978-add-page-content-to-fuzzy-search
  • IGVF-1983-catalog-adapter-prop
  • IGVF-1986-f1-cross-enums
  • IGVF-1987-add-affiliate-member
  • IGVF-1988-not-compliant-seq-kit
  • IGVF-1990-matrix-file-summary
  • IGVF-1991-241023-ont-update
  • IGVF-1992-add-redis
  • IGVF-1996-basecalling-step
  • IGVF-1997-MPRA-outputs
  • IGVF-1999-input-for-rename
  • IGVF-2001-home-updates
  • IGVF-2006-preferred-title
  • IGVF-2010-meas-set-summary-update
  • IGVF-2011-tabular-file
  • IGVF-2013-dbxrefs-ISGR
  • IGVF-2016-analysis-set-list-updates-npm
  • IGVF-2018-table-fileset-type
  • IGVF-2020-asv-rev-link
  • IGVF-2024-fused-domain-exp
  • IGVF-2027-txt-admin
  • IGVF-2028-external-data
  • IGVF-2029-rm-dup-props-in-images
  • IGVF-2030-remainin-enum-desc
  • IGVF-2031-embed-assessed-genes
  • IGVF-2034-docker-compose-version-obsolete
  • IGVF-2035-analysis-set-facets
  • IGVF-2036-analysis-set-summary
  • IGVF-2037-calc-anaset-workflow
  • IGVF-2039-adjust-audit-levels
  • IGVF-2040-reference-external
  • IGVF-2041-debugging
  • IGVF-2041-text-file-preview
  • IGVF-2042-add-uniform-pipeline-property
  • IGVF-2045-graph-download
  • IGVF-2046-graph-edge
  • IGVF-2047-file-graph-vertical-size
  • IGVF-2049-file-graph-loops
  • IGVF-2052-add-seqfile-read-enum
  • IGVF-2055-add-redis-alarms
  • IGVF-2056-cache-common-objects
  • IGVF-2061-uniform-pipeline-ui
  • IGVF-2062-attribution-panel-removal
  • IGVF-2064-read-count-alignment
  • IGVF-2065-file-object-update-npm
  • IGVF-2066-file-search
  • IGVF-2067-file-summary-updates
  • IGVF-2069-audit-no-pubs
  • IGVF-2070-audit-no-measurement-sets
  • IGVF-2071-display-submitter-comment
  • IGVF-2072-hicar-outputs
  • IGVF-2074-electroporated-mpra
  • IGVF-2076-custom-assembly
  • IGVF-2080-file-modal-report
  • IGVF-2081-control-CLS
  • IGVF-2084-control-access
  • IGVF-2085-boolean-property-defaults
  • IGVF-2090-UI-new-properties
  • IGVF-2091-new-base-mod-enums
  • IGVF-2095-fileset-facets
  • IGVF-2097-file-facets
  • IGVF-2098-file-graph-counts
  • IGVF-2099-audit-float-sample
  • IGVF-2102-dataset-summary-agg
  • IGVF-2103-add-bai
  • IGVF-2107-rm-cell-fate-treatments
  • IGVF-2110-add-onlist-to-measet
  • IGVF-2111-more-hicar-outputs
  • IGVF-2113-index-file
  • IGVF-2117-gencode-32
  • IGVF-2119-fix-input-for-display
  • IGVF-2124-input-file-collapse
  • IGVF-2128-analysis-set-summ-fix
  • IGVF-2131-apoe-carrier-enum-upgrade
  • IGVF-2133-panel-directory
  • IGVF-2135-rm-audit-curated
  • IGVF-2137-image-status
  • IGVF-2138-fix-matrix-audit
  • IGVF-2139-link-data-model
  • IGVF-2141-double-max-indexing-tasks
  • IGVF-2143-alt-facet-count
  • IGVF-2143-facet-redesign-npm
  • IGVF-2147-cypress-indexing-fix
  • IGVF-2150-remove-prefetching
  • IGVF-2158-targeted-genes-meas-set
  • IGVF-2159-fix-facet
  • IGVF-2161-file-preview-update
  • IGVF-2162-fix-bulk-crispr-audits
  • IGVF-2163-validation-exempted
  • IGVF-2165-add-preview-status
  • IGVF-2166-preview-status-npm
  • IGVF-2169-gihub-issues-link
  • IGVF-2172-aviti-seq-kit
  • IGVF-2173-derived-from-audit-fix
  • IGVF-2175-require-assembly
  • IGVF-2178-index-file
  • IGVF-2179-barcode-onlist
  • IGVF-2180-boolean-facets
  • IGVF-2182-status-embed
  • IGVF-2186-validation-exempted
  • IGVF-2187-matrix-file-peaks
  • IGVF-2188-variant-effects
  • IGVF-2189-fix-preview-disappear
  • IGVF-2189-fix-preview-disappear-2
  • IGVF-2190-update-facets
  • IGVF-2191-fix-files-embedding
  • IGVF-2194-non-targeting-guides
  • IGVF-2195-date-range-facet
  • IGVF-2196-add-sample-model
  • IGVF-2199-audit-control
  • IGVF-2200-sample-embedding
  • IGVF-2202-perturb-seq-schema-change
  • IGVF-2203-model-name-summary
  • IGVF-2204-index-file-summary
  • IGVF-2210-site-search-query
  • IGVF-2211-elem-bio-company
  • IGVF-2215-sequencing-kit
  • IGVF-2216-fix-assay-term-VFF
  • IGVF-2217-varaccess
  • IGVF-2218-dbxrefs-ISGR
  • IGVF-2221-image-file-log
  • IGVF-2222-MPRA-read-names
  • IGVF-2223-current-schema-version
  • IGVF-2225-file-column-embed
  • IGVF-2227-pat-enum-descs
  • IGVF-2229-analysis-step-version-page
  • IGVF-2231-upload-restrict-status
  • IGVF-2234-calcified-enum
  • IGVF-2237-fix-IGSR
  • IGVF-2238-add-targeton-summary-CLS
  • IGVF-2239-calc-soft-vers
  • IGVF-2240-add-mtx-file-format-and-content
  • IGVF-2242-add-pt-to-model-file-format
  • IGVF-2243-fix-audit-display
  • IGVF-2244-static-resources
  • IGVF-2245-multi-seqspec-audit
  • IGVF-2247-analysis-step-version-table
  • IGVF-2249-enum-sig-tab
  • IGVF-2251-random-selection
  • IGVF-2253-new-tabfile-content
  • IGVF-2254-quality-metric
  • IGVF-2255-qualifier-summary
  • IGVF-2257-mtx-file-spec-audit
  • IGVF-2258-checkfiles-version
  • IGVF-2260-filtered-file
  • IGVF-2261-adjust-seqspec-audit
  • IGVF-2262-catalog-v0-5
  • IGVF-2264-tissue-summary
  • IGVF-2266-computational-tools
  • IGVF-2267-predictive-model-page
  • IGVF-2269-analysis-step-types-enums
  • IGVF-2271-fix-software-regex
  • IGVF-2272-gzip-mtx
  • IGVF-2273-embed-strain-ethnic
  • IGVF-2276-calc-cls
  • IGVF-2277-stats-facet
  • IGVF-2278-default-columns
  • IGVF-2279-wgs-enum
  • IGVF-2283-add-nn-architecture
  • IGVF-2284-gastruloid-dependencies
  • IGVF-2286-add-embeddings
  • IGVF-2287-uniformly-processed
  • IGVF-2288-nucleic-acid-delivery
  • IGVF-2289-branch-for-QA
  • IGVF-2289-hierarchical-facets
  • IGVF-2291-file-checkfiles-version
  • IGVF-2292-add-kallisto-index-enums
  • IGVF-2294-sample-barcode-matrix
  • IGVF-2295-read-names
  • IGVF-2297-gencode-47-m36
  • IGVF-2299-CRISPR-MACS
  • IGVF-2302-cypress-facet-fix
  • IGVF-2303-add-scmito-seq-enum
  • IGVF-2304-spot-barcode
  • IGVF-2305-embed-cell-subpool
  • IGVF-2306-add-chromap-index-enums
  • IGVF-2307-step-version-report-link
  • IGVF-2308-add-readnames-audit
  • IGVF-2310-biosample-qualifiers
  • IGVF-2314-adjust-audit-levels
  • IGVF-2318-summary-dmux-samples
  • IGVF-2319-aset-summary-cls-only
  • IGVF-2320-improve-sample-summary
  • IGVF-2322-tailwind-css-v4
  • IGVF-2323-display-description
  • IGVF-2325-construct-library-table
  • IGVF-2326-login-sync
  • IGVF-2328-adjust-miss-link
  • IGVF-2329-collection-badges
  • IGVF-2332-cell-model-page
  • IGVF-2333-assay-table-page
  • IGVF-2340-adjust-file-sets
  • IGVF-2342-calc-mux-samp-class
  • IGVF-2344-protein-language
  • IGVF-2346-model-source-enum
  • IGVF-2348-file-table-filtered
  • IGVF-2351-access-atac
  • IGVF-2352-remove-scpipe-audits
  • IGVF-2353-institutional-certificate-ui
  • IGVF-2357-ic-props-facets
  • IGVF-2358-audit-transcriptome
  • IGVF-2360-object-history
  • IGVF-2362-remove-facet-groups
  • IGVF-2363-search-values
  • IGVF-2365-definition-ontology
  • IGVF-2366-schema-clinical-scores
  • IGVF-2369-expand-software-category
  • IGVF-2370-add-ethnicities-enum
  • IGVF-2373-file-set-construct-library
  • IGVF-2374-gencode-v22
  • IGVF-2375-missing-enum-desc
  • IGVF-2376-gene-collections
  • IGVF-2377-gene-facets
  • IGVF-2378-gersbach-additions
  • IGVF-2379-extend-gene-chrom
  • IGVF-2381-genomic-elements
  • IGVF-2387-add-omnimatrix-endpoint
  • IGVF-2391-control-type
  • IGVF-2393-form-errors
  • IGVF-2395-qc-more-defs
  • IGVF-2396-file-preview-locations
  • IGVF-2397-march2025-ont-update
  • IGVF-2399-calculate-definition
  • IGVF-2401-fix-audit-nucleic
  • IGVF-2403-ic-audit-mux-hs-mm
  • IGVF-2405-ic-partner-labs
  • IGVF-2407-data-use-lim-embed
  • IGVF-2408-analysis-step-file-types
  • IGVF-2409-demux-sample-audit
  • IGVF-2412-anaset-onlist-audit-bug
  • IGVF-2413-targeted-term-ui
  • IGVF-2415-add-validate-onlist-on-seqspec
  • IGVF-2417-ic-matching-audit
  • IGVF-2418-fix-audit-transcript
  • IGVF-2420-tab-primer-seq
  • IGVF-2425-remove-CLS-audit
  • IGVF-2426-remove-crispr-growth
  • IGVF-2428-strand-specificity
  • IGVF-2430-embed-dul
  • IGVF-2431-preferred-assay-titles
  • IGVF-2432-calculated-prop
  • IGVF-2434-tissue-organ
  • IGVF-2439-multiplexed-sample-cls
  • IGVF-2440-assay-slims-facet
  • IGVF-2441-assay-slim-default
  • IGVF-2442-metadata-tsv
  • IGVF-2443-allow-cors-genome-browser
  • IGVF-2444-lib-delivery-summary
  • IGVF-2448-dul-ic-samples
  • IGVF-2450-vidal-preferred-assay
  • IGVF-2453-applied-to-samples-report-link
  • IGVF-2455-schema-title-search
  • IGVF-2456-ic-partner-labs
  • IGVF-2460-remove-anvil-dependency
  • IGVF-2463-fix-assay-title
  • IGVF-2466-baseline-control
  • IGVF-2467-annotated-from
  • IGVF-2468-transcriptome-annotation-enum
  • IGVF-2469-step-ver-set-status
  • IGVF-2470-add-more-file-facets
  • IGVF-2473-mux-sample-ic-calc-bug
  • IGVF-2474-cc-badge
  • IGVF-2475-protect-restricted-file-download
  • IGVF-2478-dedup-contents
  • IGVF-2480-checkfiles-version-adjustment
  • IGVF-2481-step-version-model-page
  • IGVF-2483-controlled-access
  • IGVF-2484-dbxrefs-not-required
  • IGVF-2486-pooled-sample-dependency
  • IGVF-2487-cram-file
  • IGVF-2489-taxa-summary-front
  • IGVF-2492-strain-bkg-embed
  • IGVF-2497-fix-cypress-test
  • IGVF-2499-curated-set-file-table
  • IGVF-2500-report-name
  • IGVF-2501-mpra-qc-update
  • IGVF-2503-adjust-configfile-onlist-flag
  • IGVF-2505-audit-missing-input
  • IGVF-2506-ignore-external
  • IGVF-2508-audit-no-asv
  • IGVF-2509-ic-audit-improvement
  • IGVF-2511-sample-mixed-ic
  • IGVF-2512-calc-dul-summary
  • IGVF-2516-pooled-sample-error
  • IGVF-2517-sample-term-page
  • IGVF-2519-e2g-addition
  • IGVF-2520-ic-summary
  • IGVF-2521-file-format-vcf
  • IGVF-2524-aset-col-rename
  • IGVF-2525-file-set-modal
  • IGVF-2526-expand-strand-audit
  • IGVF-2528-10x-scale
  • IGVF-2529-ccf-audit
  • IGVF-2534-cls-metadata
  • IGVF-2535-relax-indexfile-audit
  • IGVF-2537-adj-txn-ref-anaset
  • IGVF-2539-add-search-configs
  • IGVF-2540-sc-qc-updates
  • IGVF-2541-remove-prime
  • IGVF-2542-mpra-qc-changelog
  • IGVF-2543-history-user-id
  • IGVF-2546-add-analysis-step-type
  • IGVF-2548-add-assessed-genes-to-models
  • IGVF-2550-barcode-map-report-link
  • IGVF-2554-tap-seq-primer
  • IGVF-2555-methylated-reads
  • IGVF-2557-custom-assembly
  • IGVF-2559-dul-compare-audit
  • IGVF-2560-add-mtx-file-content-enum
  • IGVF-2561-aliases-regex-update
  • IGVF-2562-analysis-CLS-summary
  • IGVF-2563-aset-summary-control
  • IGVF-2565-aset-assay-summary
  • IGVF-2566-rm-scatac-qc-props
  • IGVF-2571-resource-toolbar
  • IGVF-2572-fix-treatment-facet
  • IGVF-2573-analysis-step-version-page
  • IGVF-2575-fix-analysis-step-embedding
  • IGVF-2576-software-version-page
  • IGVF-2578-barcode-map-fixes
  • IGVF-2580-file-graph-qc-metrics
  • IGVF-2581-adjust-seqspec-audits
  • IGVF-2582-site-search-paths
  • IGVF-2588-audit-anvil
  • IGVF-2594-add-ic-properties-facets
  • IGVF-2595-dul-controlled-access
  • IGVF-2596-dul-summary-dash
  • IGVF-2598-dul-controlled-results
  • IGVF-2599-calc-file-ctrl-access
  • IGVF-2603-audit-dispatcher
  • IGVF-2605-audit-annotated-from
  • IGVF-2607-bug-fix-2559
  • IGVF-2608-aset-sample-summary-fix
  • IGVF-2609-update-audit-inherit
  • IGVF-2610-pod5-no-seqspec
  • IGVF-2616-standardized
  • IGVF-2618-generic-seqspec
  • IGVF-2621-integrated-in-facet
  • IGVF-2622-puro-thy-mods
  • IGVF-2625-sc-multiome-nt
  • IGVF-2627-stats-facet-file-size
  • IGVF-2629-computational-tools
  • IGVF-2632-validation-exempt
  • IGVF-2633-standardized-document-column
  • IGVF-2634-superstarr-summary
  • IGVF-2638-fix-ctrl-access-prop-name
  • IGVF-2639-change-methodology-menu
  • IGVF-2641-human-tissue-matrix
  • IGVF-2644-aset-summary-updates
  • IGVF-2645-align-base-mods
  • IGVF-2647-add-replacement-barcode-file
  • IGVF-2649-aset-summary-bug
  • IGVF-2650-aux-set-summary
  • IGVF-2651-update-missing-seqspec-audit
  • IGVF-2652-fix-strand-audit
  • IGVF-2653-file-section-search-result
  • IGVF-2658-undefine-desired-count
  • IGVF-2660-qc-rm-more-props
  • IGVF-2661-human-tissue-matrix
  • IGVF-2662-skip-genome-assay-audit
  • IGVF-2662-skip-genome-assay-audit-for-txn-ref
  • IGVF-2663-seqspec-doc
  • IGVF-2666-checkbox-file-size
  • IGVF-2668-add-preview-timestamp
  • IGVF-2671-tap-seq
  • IGVF-2672-add-barcode-replace-file-audit
  • IGVF-2673-sort-dulm-tags
  • IGVF-2675-fix-old-changelogs
  • IGVF-2677-fileset-dul-search
  • IGVF-2678-fix-unexpected-genes
  • IGVF-2680-controlled-access-file-set-search
  • IGVF-2682-adjust-fe-scaling
  • IGVF-2683-analysis-summary-SGE
  • IGVF-2686-duplicate-phenotype
  • IGVF-2691-mtsc-multiome
  • IGVF-2692-rename-ctrl-trans
  • IGVF-2695-affiliate-menu
  • IGVF-2697-barcode-replacement-audit-bug-fix
  • IGVF-2700-rm-unexpected-workflows
  • IGVF-2701-object-history-highlight
  • IGVF-2702-mismatched-status-audit
  • IGVF-2705-fileset-reference-files
  • IGVF-2706-ont-update
  • IGVF-2707-adjust-auxiliary-audit
  • IGVF-2710-add-variant-pathogenicity
  • IGVF-2712-dul-summaries-ui
  • IGVF-2713-scrna-qc-update
  • IGVF-2715-update-definition
  • IGVF-2717-update-workflow-facets
  • IGVF-2718-tar-file-new-enum
  • IGVF-2719-workflow-semantic-ver
  • IGVF-2721-prediction-set-toolbar
  • IGVF-2723-mpra-bed-formats
  • IGVF-2725-remove-anvil-block
  • IGVF-2726-methylation-enums
  • IGVF-2728-limit-date-picker-range
  • IGVF-2730-deprecate-ceres
  • IGVF-2732-bigbed-tab-file
  • IGVF-2733-prediction
  • IGVF-2734-add-asv-to-workflow
  • IGVF-2735-rm-workflow
  • IGVF-2736-analysis-step-workflow
  • IGVF-2738-file-object-page-metrics
  • IGVF-2739-mod-predset-audit
  • IGVF-2741-gencode-v24
  • IGVF-2743-computational-tools-crash
  • IGVF-2744-add-default-part-2
  • IGVF-2747-quality-metric-pages
  • IGVF-2749-base-mod-summary
  • IGVF-2751-cell-painting-audit
  • IGVF-2752-add-recursive-download
  • IGVF-2754-batch-download-update
  • IGVF-2755-file-batch-download
  • IGVF-2757-parse-perturb-seq
  • IGVF-2758-mux-method-summary
  • IGVF-2761-multiplexed-sample-title
  • IGVF-2762-derived-barcode-map
  • IGVF-2764-bulk-objects-req-id
  • IGVF-2766-robots
  • IGVF-2769-bulk-requests
  • IGVF-2774-disable-link-prefetch
  • IGVF-2775-add-waf
  • IGVF-2778-tar-tabular
  • IGVF-2779-nm-base-mod
  • IGVF-2780-tagged-proteins-display
  • IGVF-2781-pipe-param-enum
  • IGVF-2783-associated-pheno-pred
  • IGVF-2785-y2h-imaging-content-types
  • IGVF-2786-remove-pre-post-selection
  • IGVF-2788-gene-program-content-types
  • IGVF-2789-pooled-sample-summary
  • IGVF-2790-cache-indexer-state
  • IGVF-2792-fix-section-directory
  • IGVF-2793-scnt-seq3
  • IGVF-2795-ethnicities-african-enums
  • IGVF-2796-add-be-waf
  • IGVF-2797-analysis-prediction-search-configs
  • IGVF-2798-mux-samp-term
  • IGVF-2800-ordered-lists
  • IGVF-2802-issue-link
  • IGVF-2803-sort-home-page-charts
  • IGVF-2805-tissue-organ-part-2
  • IGVF-2807-workflow-version
  • IGVF-2811-ethnicity-not-hispanic
  • IGVF-2812-cut-n-run
  • IGVF-2813-add-immune-sge-label
  • IGVF-2815-sort-report-column-arrays
  • IGVF-2816-display-summary
  • IGVF-2820-unify-assays
  • IGVF-2821-perturb-seq-expectation
  • IGVF-2822-matrix-transcriptome
  • IGVF-2824-optimize-tailwind
  • IGVF-2825-auth-err-redirect
  • IGVF-2826-add-search-config-embedding
  • IGVF-2827-add-model-file-descrp
  • IGVF-2830-affliate-membership-link
  • IGVF-2831-report-cell-renderers
  • IGVF-2832-embed-softwares-on-files
  • IGVF-2833-control-types
  • IGVF-2834-allow-release-time
  • IGVF-2835-cls-file-sets
  • IGVF-2836-audit-no-barcode-map
  • IGVF-2837-analysis-targeted-genes
  • IGVF-2838-prediction-samples
  • IGVF-2839-file-graph-crash
  • IGVF-2840-crispr-modality
  • IGVF-2841-audit-facets-calc-assembly
  • IGVF-2843-circleci-cypress
  • IGVF-2845-ignore-controls
  • IGVF-2846-sample-props
  • IGVF-2847-fix-upgrade
  • IGVF-2847-fix-upgrade-2
  • IGVF-2850-sort-report-lists
  • IGVF-2851-anaset-pipe-stat
  • IGVF-2854-pfa-model-set
  • IGVF-2856-originated-from-all-samples
  • IGVF-2857-rds-file-format
  • IGVF-2859-update-props
  • IGVF-2860-fix-unexpect-barcode
  • IGVF-2861-fix-analysis-summary
  • IGVF-2864-grouped-sequence-table
  • IGVF-2865-aset-summary-bug
  • IGVF-2868-CLS-set-status
  • IGVF-2869-audit-primers
  • IGVF-2870-upload-status
  • IGVF-2874-library-design-files
  • IGVF-2875-reference-file-summary
  • IGVF-2876-display-assay-titles
  • IGVF-2877-group-file-graph-nodes
  • IGVF-2877-old-attempt
  • IGVF-2878-add-file-embeddings
  • IGVF-2880-scmult-nt-audit
  • IGVF-2881-targeted-gene-fix
  • IGVF-2882-pipeline-configs
  • IGVF-2885-rm-assembly-align-signal
  • IGVF-2886-tab-file-reference-prop
  • IGVF-2889-fix-uniform-pipeline-crash
  • IGVF-2890-file-graph-modal-stacking
  • IGVF-2891-report-exceeding-columns
  • IGVF-2892-audit-missing-desc
  • IGVF-2897-calc-assembly-align-signal
  • IGVF-2898-fix-dep-clashes
  • IGVF-2899-collection-tf-perturb
  • IGVF-2900-file-analysis-step-version
  • IGVF-2901-donors-samples-file-sets
  • IGVF-2902-cls-samples-donors
  • IGVF-2903-cov-matrix-model
  • IGVF-2905-CROP-seq
  • IGVF-2907-home-chart-titles
  • IGVF-2908-fix-unexpected-barcode
  • IGVF-2909-calculated-array-props
  • IGVF-2910-CC-Perturb-seq
  • IGVF-2911-prediction-set-required
  • IGVF-2912-gvcf-format
  • IGVF-2913-new-qtl-enums
  • IGVF-2915-time-post-library
  • IGVF-2916-analysysset-pipeline
  • IGVF-2918-parse-perturb-seq
  • IGVF-2919-collection-catalog-enum
  • IGVF-2921-catalog-collection-badge
  • IGVF-2922-fix-hgnc-link
  • IGVF-2923-model-file-desc
  • IGVF-2925-assay-page-repair
  • IGVF-2926-assay-page-matrix
  • IGVF-2927-mouse-t2t-enum
  • IGVF-2933-add-file-types
  • IGVF-2934-fix-audits
  • IGVF-2935-primer-designs
  • IGVF-2936-diff-guide-quants
  • IGVF-2937-ref-files-audit-file-set
  • IGVF-2937-reference-files-type-audit
  • IGVF-2941-add-enum-zip-barcode
  • IGVF-2942-cc-mouse-enums
  • IGVF-2943-pipline-parameters
  • IGVF-2948-replace-d3-dag
  • IGVF-2949-add-file-content-type
  • IGVF-2950-fix-samples
  • IGVF-2952-seq-column
  • IGVF-2954-workflow-updates
  • IGVF-2956-as-asv-updates
  • IGVF-2958-workflow-page-update
  • IGVF-2959-anaylsisstep-workflow
  • IGVF-2959-workflow-links
  • IGVF-2960-add-catalog-collections
  • IGVF-2961-ultima-company-enum
  • IGVF-2962-ug-solaris-kit
  • IGVF-2963-validate-onlist
  • IGVF-2965-preferred-assay-titles
  • IGVF-2966-strand-spec-def
  • IGVF-2971-index-ref-file
  • IGVF-2973-add-external-links
  • IGVF-2979-del-ref-file-audit
  • IGVF-2983-homo-sapiens-tissue
  • IGVF-2984-ref-file-audit-fix
  • IGVF-2988-image-url-array
  • IGVF-2989-add-anvil-url
  • IGVF-2990-demux-sample-audit-fix
  • IGVF-2991-recalc-sub-pooled
  • IGVF-2992-barcode-donor-enum
  • IGVF-2993-mod-state-enum
  • IGVF-2995-portal-issues-link
  • IGVF-2996-GENCODE-38
  • IGVF-2997-donor-summary
  • IGVF-2998-donor-ethnicity
  • IGVF-3002-dlc
  • IGVF-3006-rm-muxsamp-props
  • IGVF-3008-add-incorrect-bucket-audit
  • IGVF-3017-set-status-update
  • IGVF-3018-remodel-stiffness
  • IGVF-3019-selection-criteria
  • IGVF-3023-t2t-transcript-ann-enum
  • IGVF-3024-gRNA-fasta
  • IGVF-3027-methyl-reads-no-ref
  • IGVF-3029-differentiation-admin
  • IGVF-3030-enum-tooltips
  • IGVF-3032-image-url-minitem
  • IGVF-3035-fix-alignment-crash
  • IGVF-3036-curated-functional-effect
  • IGVF-3038-file-graph-crash
  • IGVF-3038-graph-fix
  • IGVF-3039-fix-assessed-genes
  • IGVF-3044-nt-seq-transcript-assay
  • IGVF-3047-add-docstring-audit
  • IGVF-3050-id-redirect
  • IGVF-3053-TF-genes
  • IGVF-418-indexer-state
  • IGVF-491-unpin-headlessui
  • IGVF-751-auth0-domain
  • IGVF-751-nextjs-auth0
  • IGVF-808-related-donors-table
  • IGVF-909-nav-border
  • IGVF-919-inconsistent-seqspec
  • IGVF-947-error-logging
  • IGVF-985-collapse-array-props
  • SNO2-28-enable-bulk-invalidation
  • SNO2-47-remove-searchterm
  • SNO2-57-batchupgrade-with-indexing
  • SNO2-58-expose-dead-letter-queue
  • SNO2-59-use-render-time-version
  • SNO2-64-allow-searches-against-object-frame
  • SNO2-68-search-config-default-group
  • SNO2-69-support-more-facets
  • SNO2-71-block-float-ints
  • V7-5-1
  • WRN-613-derived-from
  • add-collection-type-to-stats
  • add-memory-queue
  • add-metadata-endpoint
  • bump-version-8.14.0-to-8.15.0
  • bump-version-8.15.0-8.16.0
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  • bump-version-8.19.0-to-8.19.1
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  • bump-version-8.39.0
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  • bump-version-8.43.0
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  • bump-version-8.68.0
  • bump-version-8.69.0
  • bump-version-8.70.0
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  • cdk-never-require-approval
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  • feature/IGVF-2958-workflow-page-update
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  • update-version-v8.11.0
  • update-version-v8.13.0
  • zhewei-IGVF-2735-test

15 Sep 2025 06:09PM UTC coverage: 100.0%. Remained the same
#6271

push

forresttanaka
IGVF-2791-profile-caching

* Fix a Typescript conflict that was bothering me.
* Rewrite Redis caching mechanism for simplicity and for protecting the backend against stampeding when the cache expires. Rewrite two cache users to use the new mechanism.
* Cache the home-page statistics and chart data with the new caching mechanism.
* Have the indexer-state API use the new caching mechanism, making this the last usage of the old caching mechanism to update.
* Rewrite caching Jest tests to use the new module API.
* If cookies are unavailable (common in Cypress tests), continue with the cached fetch as we did with the previous caching mechanism, just without the cookie.
* Restore full Jest coverage.
* Fix 308 response from a bad URL when requesting `/api/profiles`.
* Add trailing slashes to /api endpoints to avoid 308 redirects.
* Add persistent TCP/TLS connections between our Next.js server and the backend server.
* Get full Jest coverage with the persistent connection changes.
* Move needed types from `fetch-request.d.ts` to `fetch-request.ts`. Remove FETCH_METHOD and instead use a union type.
* Clean up the fetch-request and session-context types files as well as their usage.
* Redis client is actually asynchronous.
* Add a `getCachedData()` function, and rename the old one to `getCachedDataFetch()`. Finish the rewrite of the cache module API documentation.
* Update the documentation for the cache module.
* Update an outdated import file name.
* Revert removal of cookie property from indexer-info requests.
* Corrections from Copilot code review. Added a comment warning to avoid modifying `HttpsAgent` and `HttpAgent`. Avoid a typecast for `RequestInit` objects. Remove hardcoded constants. Corrected a grammar error.
* Cleaned up the last changes I made to indexer-state.
* Fix a missing type in a FetchRequest method.
* Fix async calls with `mockReturnValue` to use `mockResolvedValue` instead.

1682 of 1682 branches covered (100.0%)

Branch coverage included in aggregate %.

99 of 99 new or added lines in 9 files covered. (100.0%)

3781 of 3781 relevant lines covered (100.0%)

19.27 hits per line

Relevant lines Covered
Build:
Build:
3781 RELEVANT LINES 3781 COVERED LINES
19.27 HITS PER LINE
Source Files on IGVF-2791-profile-caching
  • Tree
  • List 178
  • Changed 7
  • Source Changed 0
  • Coverage Changed 7
Coverage ∆ File Lines Relevant Covered Missed Hits/Line Branch Hits Branch Misses

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
#6271 IGVF-2791-profile-caching IGVF-2791-profile-caching * Fix a Typescript conflict that was bothering me. * Rewrite Redis caching mechanism for simplicity and for protecting the backend against stampeding when the cache expires. Rewrite two cache users to use the new mechani... push 18 Sep 2025 09:51PM UTC forresttanaka
100.0
#6255 IGVF-2791-profile-caching IGVF-2791-profile-caching * Fix a Typescript conflict that was bothering me. * Rewrite Redis caching mechanism for simplicity and for protecting the backend against stampeding when the cache expires. Rewrite two cache users to use the new mechani... Pull #890 15 Sep 2025 06:12PM UTC forresttanaka
100.0
#6254 IGVF-2791-profile-caching IGVF-2791-profile-caching * Fix a Typescript conflict that was bothering me. * Rewrite Redis caching mechanism for simplicity and for protecting the backend against stampeding when the cache expires. Rewrite two cache users to use the new mechani... Pull #890 15 Sep 2025 05:45PM UTC forresttanaka
100.0
#6253 IGVF-2791-profile-caching IGVF-2791-profile-caching * Fix a Typescript conflict that was bothering me. * Rewrite Redis caching mechanism for simplicity and for protecting the backend against stampeding when the cache expires. Rewrite two cache users to use the new mechani... Pull #890 15 Sep 2025 05:32PM UTC forresttanaka
100.0
#6252 IGVF-2791-profile-caching IGVF-2791-profile-caching * Fix a Typescript conflict that was bothering me. * Rewrite Redis caching mechanism for simplicity and for protecting the backend against stampeding when the cache expires. Rewrite two cache users to use the new mechani... Pull #890 15 Sep 2025 05:03PM UTC forresttanaka
100.0
#6250 IGVF-2791-profile-caching IGVF-2791-profile-caching * Fix a Typescript conflict that was bothering me. * Rewrite Redis caching mechanism for simplicity and for protecting the backend against stampeding when the cache expires. Rewrite two cache users to use the new mechani... push 15 Sep 2025 04:00PM UTC forresttanaka
100.0
#6249 IGVF-2791-profile-caching IGVF-2791-profile-caching * Fix a Typescript conflict that was bothering me. * Rewrite Redis caching mechanism for simplicity and for protecting the backend against stampeding when the cache expires. Rewrite two cache users to use the new mechani... push 15 Sep 2025 03:31PM UTC forresttanaka
100.0
#6248 IGVF-2791-profile-caching IGVF-2791-profile-caching * Fix a Typescript conflict that was bothering me. * Rewrite Redis caching mechanism for simplicity and for protecting the backend against stampeding when the cache expires. Rewrite two cache users to use the new mechani... push 15 Sep 2025 03:29PM UTC forresttanaka
100.0
#6247 IGVF-2791-profile-caching IGVF-2791-profile-caching * Fix a Typescript conflict that was bothering me. * Rewrite Redis caching mechanism for simplicity and for protecting the backend against stampeding when the cache expires. Rewrite two cache users to use the new mechani... push 15 Sep 2025 03:18PM UTC forresttanaka
100.0
#6243 IGVF-2791-profile-caching IGVF-2791-profile-caching Redis client is actually asynchronous. push 14 Sep 2025 05:45AM UTC forresttanaka
100.0
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