IGVF-DACC / checkfiles

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LAST BUILD ON BRANCH CHECK-195-samtools

branch: CHECK-195-samtools

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• CHECK-195-samtools
• CHECK-102-local
• CHECK-106-type-error
• CHECK-114-tabular-error
• CHECK-115-txt
• CHECK-117-destroy-instance-on-fail
• CHECK-119-vcf
• CHECK-125-schema
• CHECK-127-vcf-ami
• CHECK-132-schema-remove
• CHECK-133-seqspec
• CHECK-136-extra-fields
• CHECK-138-version
• CHECK-141-mtx
• CHECK-144-variants
• CHECK-148-comment-char
• CHECK-15-igvf-checkfiles
• CHECK-158-fastq-int
• CHECK-163-guide-rna
• CHECK-165-local-docker-validation
• CHECK-166-onlist-ignore
• CHECK-167-time-to-live
• CHECK-169-log-uuid-from-content-md5
• CHECK-171-scale
• CHECK-171-scaling-again
• CHECK-175-scaling-again
• CHECK-176-seqspec-version
• CHECK-176-seqspec-version2
• CHECK-177-cram
• CHECK-179-reduce-scaling
• CHECK-182-requirements
• CHECK-184-gzip-check
• CHECK-186-reorganize-constants
• CHECK-188-cram-test
• CHECK-19-aws-goofys
• CHECK-19-google-fuse
• CHECK-190-cram-fast
• CHECK-193-MPRA
• CHECK-194-mount-dir
• CHECK-194-mouse-dir
• CHECK-198-mpra-bed
• CHECK-20-tabular-data
• CHECK-200-seqspec-update
• CHECK-206-exempt
• CHECK-208-frictionless-format
• CHECK-212-log
• CHECK-217-seqspec-update
• CHECK-22-fasta
• CHECK-221-chrom-size
• CHECK-223-gvcf
• CHECK-224-seqspec-read-id
• CHECK-225-docker-cmd
• CHECK-227-coveralls
• CHECK-228-mpra-schema
• CHECK-23-validate-fastq
• CHECK-231-seqspec
• CHECK-234-gzip-return-early
• CHECK-235-seqspec-merge
• CHECK-237-tab-schema
• CHECK-239-rds
• CHECK-24-validateFiles
• CHECK-242-long-read-fastq
• CHECK-243-h5ad
• CHECK-245-barcode-sample
• CHECK-246-seqspec
• CHECK-247-upgrade-rust
• CHECK-26-no-mounting
• CHECK-35-multiprocess
• CHECK-35-multiprocessing
• CHECK-36-packer
• CHECK-38-reorganize
• CHECK-40-skip-files-with-active-creds
• CHECK-41-patch-objects
• CHECK-42-limit-number-of-files
• CHECK-43-patch-as-you-go
• CHECK-45-fastq-no-disk
• CHECK-48-check-all
• CHECK-50-upload-credentials-bug
• CHECK-51-automatic-run
• CHECK-53
• CHECK-53-separate-accounts
• CHECK-55-slack-notifications
• CHECK-56-scale-instance-types
• CHECK-57-increase-execution-timeout
• CHECK-59-bug-fixes
• CHECK-62-update-ami-ids
• CHECK-63-content-md5-bug
• CHECK-65-updates-to-zip-file-formats
• CHECK-66-file-format-type-validation
• CHECK-69-more-types
• CHECK-70-refactor
• CHECK-72-missing-assembly-error
• CHECK-740-update-md5-error
• CHECK-77-tabular
• CHECK-81-deployment-tags
• CHECK-82-csv
• CHECK-83-chrom
• CHECK-84-add-mm10
• CHECK-87-mpra-starr
• CHECK-88-1024-buffer
• CHECK-88-update-amis-2
• CHECK-89-controlled-access-checkfiles-code
• CHECK-89-controlled-access-files
• CHECK-89-controlled-access-infra
• CHECK-97-tabular-variant
• CHECK-98-peg-rna
• IGVF-1827-content-type
• basedir-default
• bump-version-v15
• bump-version-v17
• bump-version-v18
• bump-version-v19
• bump-version-v20
• bump-version-v21
• bump-version-v22
• bump-version-v23
• bump-version-v24
• bump-version-v25
• bump-version-v26
• bump-version-v27
• bump-version-v28
• bump-version-v29
• bump-version-v30
• bump-version-v31
• bump-version-v32
• bump-version-v33
• bump-version-v34
• bump-version-v35
• dev
• fix-linting
• fix-main
• fix-typo
• main
• readme-fix
• release-v2-tag
• revert-41-dev
• samtools-packer
• savemain
• v12-sandbox-v12-prod
• v13-sandbox-v13-prod
• v14-sandbox-v13-prod
• v14-sandbox-v14-prod
• v15-sandbox-v14-prod
• v17-sandbox-v16-prod
• v17-sandbox-v17-prod
• v18-sandbox-v17-prod
• v18-sandbox-v18-prod
• v19-sandbox-v18-prod
• v19-sandbox-v19-prod
• v20-sandbox-v19-prod
• v20-sandbox-v20-prod
• v21-sandbox-v20-prod
• v22-sandbox-v20-prod
• v23-sandbox-v20-prod
• v23-sandbox-v23-prod
• v24-sandbox-v23-prod
• v24-sandbox-v24-prod
• v25-sandbox-v24-prod
• v25-sandbox-v25-prod
• v26-sandbox-v25-prod
• v27-sandbox-v25-prod
• v27-sandbox-v27-prod
• v28-sandbox-v27-prod
• v28-sandbox-v28-prod
• v29-sandbox-v28-prod
• v29-sandbox-v29-prod
• v30-sandbox-v29-prod
• v30-sandbox-v30-prod
• v31-sandbox-v30-prod
• v31-sandbox-v31-prod
• v32-sandbox-v31-prod
• v32-sandbox-v32-prod
• v34-sandbox-v32-prod
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• v4-sandbox-v3-prod
• v5-sandbox-v4-prod
• v5-sandbox-v5-prod
• v6-sandbox-v6-prod
• v8-sandbox-v7-prod
• v9-sandbox-v9-prod

Build # a1812260-e861-440c-8274-cffefe7f5f1f

Build Type

push

circleci

Committed by mingjiecn

Commit Message

add script to install samtools

Run Details

966 of 1156 relevant lines covered (83.56%)

0.84 hits per line