HERA-Team / hera_cal

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• fix_notebook
• 2pol-apply-cal
• Amplitude-Normalization-Convention
• HERACal-io
• HERAData_SoftContainer
• JD2RA_update
• UVData_to_dict_bug_fix
• aa_freqs
• aa_to_info_tolerance
• abs_amp_lincal
• abs_omni_refant_phs
• abscal
• abscal-chisq
• abscal-flagging
• abscal-key-error-fix
• abscal-ravel-fix
• abscal-redcal-test
• abscal-run-rewrite
• abscal_abs_amp_gain_bug
• abscal_antenna_check_fix
• abscal_chisq_flag_fix
• abscal_drive_edits
• abscal_edits
• abscal_fix
• abscal_gain_convention
• abscal_lstbin_h2c_prep
• abscal_match_times_fix
• abscal_model_rephase_fix
• abscal_pass_quality
• abscal_refant_phase_solvers
• abscal_run_update
• abscal_run_updates
• abscal_solar_flag
• abscal_total_keys_fix
• abscal_updates
• abscal_validation
• add-io-pseudostokes
• add-license
• add-redcal
• add_abscal
• add_dict_functions_to_DC
• add_dspec
• add_io
• add_version_info
• amplitude-degen-to-match-imaging-flux
• apply-cal-to-flaggged
• apply_cal
• apply_cal_partial_io
• apply_cal_spectrum
• apply_cutbls
• apriori_status
• autoref_dlyfit_update
• average_smooth_gains
• band_edge_flagging
• band_edge_flagging_defaults
• better_ex_ants
• broadcast_flags
• cal-smooth-prev-next-fix
• cal_formats_test_fix
• change_default_delay_window
• change_default_skip_wgt
• chisq_per_bl
• cm_integration
• cm_update
• conftest
• datacontainer_bool_fix
• delay-filter-partial-io
• delay_filter_edge_flag
• delay_filter_script
• delete_abscal_format
• deprecate-firstcal-omnical
• dly_filt_edge_flag_typo
• dly_filt_verbose
• dly_fltr_write_rfi_cln
• dlyfilt_write_mdl_and_res
• dlyfilter_truncate_mdl
• ex_ants_to_extract_hh
• extract_hh
• extract_hh_fixes
• extract_hh_overwrite
• feature/find-rotated-antennas
• firstcal-omnical-deprecation
• firstcal_gain_flags_fix
• firstcal_maxiter
• firstcal_removedegen
• firstcal_run_overwrite
• firstcal_update
• fit_reflection_delay_update
• fix-4-pol-remove-degen
• fix-abscal-tip-tilt
• fix-amplitude-renormalization
• fix-avg-red-data
• fix-fft-dly
• fix-flag-nchan
• fix-inplace-rephase
• fix-load-flags
• fix-redcal-degen-counting
• fix-unittest
• fix-warnings-test
• fix_abscal_apply_gains
• fix_calfits_warnings
• fix_delay_filter_wgts_test
• fix_extract_script
• fix_iers
• fix_io_write_cal
• fix_lst_bin_files
• fix_pos_reds
• fix_setup
• fix_time_filter
• fix_uvfits_coords
• fix_uvws
• flag_missing
• frf
• get-reds-branchcut
• get_filled_data_patch
• gp_interp_refactor
• h1c
• hera_cal_3.0
• hera_qm_fix
• hera_qm_integration
• heradata-multifile-metadata-fix
• heradata_updates
• idr3_abscal_lstbin_updates
• import_cleanup
• install_data
• interp_u_zpad
• io-memory-improvement
• io_apply_cal
• io_load_vis_lst_array_update
• io_lstbin_integration_time_update
• io_lstfile_uvh5
• io_update_UVData
• io_write_cal_2pol_fix
• io_write_cal_check_zero
• io_write_cal_update
• io_write_cal_zero_check
• is_redcalable
• issue180/deprecate_UVData_to_dict
• iterative-global-phase-cal
• linear_vis_clean
• load_vis_partial_io
• lst-wrap-fix
• lst_bin_bugfix_and_outputfile_spec
• lst_cal
• lst_fix_missing_data_fill
• lst_rephase
• lstbin
• lstbin_argparse_updates
• lstbin_argparser_kwargs
• lstbin_pipe_edits
• lstbin_run_edit
• lstbin_run_script_py3
• lstbin_starting_LST
• lstbin_updates
• lstbin_vis_units_io_blarr
• lstbinning
• lstbinning2
• make-datacontainer-polarization-case-insensitive
• master
• memory-improvements
• minVdev
• minor_applycal_uvd_attr_fix
• model_solar_flag_fix
• more-memory-improvements
• more-pol-updates
• more_window_funcs
• move-qm-imports
• move_datacontainer
• move_pyuvdata_top2eq_to_heracal
• new_uvcal_params
• noise-and-autos
• noise-nsamples
• nose_to_pytest
• numpy-version
• omni_apply_dev
• omni_apply_fix
• omni_fix
• omni_hera_cm
• omni_run
• omni_update
• partial-io
• pep8_fixes
• phase-offset-solving
• py3-abscal-fix
• py3_for_real
• python3-reflection-fix
• pyuvdata_integration_time_update
• redcal-datacontainer-fix
• redcal-dof-fix
• redcal-edge-flagging
• redcal-import-fix
• redcal_run_fc_maxiter
• redundant_avg
• refactor_smooth_cal
• refcal_flag_prop_calfits
• reflection_fitting_update
• reflections-error
• reflections_sparse_svd
• remove-batch
• remove-degen-divide-firstcal
• remove-firstcal-recalibration
• remove-hera-sim-duplicated-code
• remove-rot-metric-json
• remove_build_lstbin_pipe
• remove_concatenate_func
• remove_get_aa_from_calfile
• remove_mpl
• remove_pbs_lstbinpipe
• remove_warnings
• replace_interp2d_w_lst_rephase
• repoint_uvflag
• res_dead_ants
• reverse_times_lsts_by_bl
• save_reds_and_update_tolerance
• scripts_cleanup
• setup_scripts
• skip_wgt_flagging
• smooth-cal-updates
• smooth_cal
• smooth_cal-dly-fix
• smooth_cal_all_flagged
• smooth_cal_delays
• smooth_cal_quality
• smooth_cal_script
• specialize-linsolve-dependency
• svd_converge_err
• tempcal_minor_update
• tidy-up-HERACal-object
• tidy_up_scripts
• timeavg_nsample
• trim_mdl_polyfit
• update-edge-flagging-default
• update-flag-io
• update-redcal-linsolve
• update-smooth-cal
• update_abscal
• update_cal
• update_extract_hh
• update_extract_hh_redux
• update_io_pol
• update_omniapply
• update_ra_lst_calculation
• update_redcal_apply
• update_run_scripts
• update_travis
• update_utils_test
• update_utils_tests
• utils_get_antpos
• utils_update
• uv2aa
• uvdata-read-super-update
• v0.0.0
• v1.0
• v1.1
• v2.0
• v3.0
• verbose_instructions
• vis-clean-info-fix
• visclean
• write_calfits
• write_vis
• x_orientation_fix
• x_orientation_fix_v2
• xants_handling
• xrfi_after_delay_filter

Updated notebook and updated some documentation and variable names